STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KZX12062.1Glutaredoxin. (92 aa)    
Predicted Functional Partners:
KZX12063.1
Ferredoxin thioredoxin reductase catalytic beta chain.
 
   
 0.951
pdhD
Dihydrolipoyl dehydrogenase.
 
 0.784
nrdD
Anaerobic ribonucleoside-triphosphate reductase.
    
 0.737
trxB
Thioredoxin reductase.
   
 0.671
dcd_1
Deoxycytidine triphosphate deaminase.
 
 
 0.544
rnp2
Ribonuclease P protein component 2; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
    
   0.528
cyaB
Adenylate cyclase CyaB.
  
  
  0.507
rnp3
Ribonuclease P protein component 3; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family.
    
   0.502
sufS
Cysteine desulfurase SufS.
    
 0.500
cadA
Putative cadmium-transporting ATPase.
   
 
 0.499
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.