STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ssuA_2Putative aliphatic sulfonates-binding protein precursor. (355 aa)    
Predicted Functional Partners:
ssuC_1
Putative aliphatic sulfonates transport permease protein SsuC.
 
 0.959
cmpD_1
Bicarbonate transport ATP-binding protein CmpD.
 
 0.939
cmpB
Bicarbonate transport system permease protein CmpB.
 
 0.912
ssuC_2
Putative aliphatic sulfonates transport permease protein SsuC.
 
 0.905
ssuC_3
Putative aliphatic sulfonates transport permease protein SsuC.
 
 0.892
cmpD_2
Bicarbonate transport ATP-binding protein CmpD.
 
 0.887
cmpD_3
Bicarbonate transport ATP-binding protein CmpD.
 
 0.875
ssuA_1
Putative aliphatic sulfonates-binding protein precursor.
 
  
 
0.659
mer
Phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase; Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family.
  
 
 0.602
glnB_1
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
   
 
 0.512
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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