Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KZX11689.1GMC oxidoreductase. (408 aa)    
Predicted Functional Partners:
KZX11260.1
Tetratricopeptide repeat protein.
  
 
 0.790
yrrB
TPR repeat-containing protein YrrB.
    
 0.762
KZX10001.1
Tetratricopeptide repeat protein.
    
 0.762
gapN
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.737
ndhI_4
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic.
 
  
 0.655
dnaK
Chaperone protein DnaK; Acts as a chaperone.
    
 0.622
gap
Glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.589
cysK1
O-acetylserine sulfhydrylase.
   
 
 0.567
rbsK
Ribokinase.
 
  
 0.567
lcfB_2
long-chain-fatty-acid--CoA ligase.
 
  
 0.561
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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