ubiD protein (Methanobrevibacter filiformis)

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Score

ubiD

3-octaprenyl-4-hydroxybenzoate carboxy-lyase. (423 aa)

Predicted Functional Partners:

bsdB

0.998

argB_2

0.937

KZX10976.1

0.720

cyoE

0.652

pyrK

0.545

KZX12522.1

0.527

gapN

0.473

KZX11689.1

0.449

lcfB_1

0.426

lcfB_2

0.426

Your Current Organism:

Methanobrevibacter filiformis

NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KZX10976.1	argB_2	MBFIL_15880	MBFIL_11060	Hypothetical protein; Belongs to the UPF0107 family.	Acetylglutamate kinase; Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids.	0.524
KZX10976.1	bsdB	MBFIL_15880	MBFIL_11270	Hypothetical protein; Belongs to the UPF0107 family.	Phenolic acid decarboxylase subunit B; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.	0.500
KZX10976.1	ubiD	MBFIL_15880	MBFIL_14480	Hypothetical protein; Belongs to the UPF0107 family.	3-octaprenyl-4-hydroxybenzoate carboxy-lyase.	0.720
KZX11689.1	bsdB	MBFIL_13340	MBFIL_11270	GMC oxidoreductase.	Phenolic acid decarboxylase subunit B; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.	0.441
KZX11689.1	gapN	MBFIL_13340	MBFIL_02580	GMC oxidoreductase.	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.737
KZX11689.1	lcfB_1	MBFIL_13340	MBFIL_04480	GMC oxidoreductase.	long-chain-fatty-acid--CoA ligase.	0.549
KZX11689.1	lcfB_2	MBFIL_13340	MBFIL_19310	GMC oxidoreductase.	long-chain-fatty-acid--CoA ligase.	0.561
KZX11689.1	ubiD	MBFIL_13340	MBFIL_14480	GMC oxidoreductase.	3-octaprenyl-4-hydroxybenzoate carboxy-lyase.	0.449
KZX12522.1	bsdB	MBFIL_11260	MBFIL_11270	Deoxyguanosinetriphosphate triphosphohydrolase-like protein.	Phenolic acid decarboxylase subunit B; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.	0.860
KZX12522.1	ubiD	MBFIL_11260	MBFIL_14480	Deoxyguanosinetriphosphate triphosphohydrolase-like protein.	3-octaprenyl-4-hydroxybenzoate carboxy-lyase.	0.527
argB_2	KZX10976.1	MBFIL_11060	MBFIL_15880	Acetylglutamate kinase; Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids.	Hypothetical protein; Belongs to the UPF0107 family.	0.524
argB_2	bsdB	MBFIL_11060	MBFIL_11270	Acetylglutamate kinase; Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids.	Phenolic acid decarboxylase subunit B; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.	0.937
argB_2	ubiD	MBFIL_11060	MBFIL_14480	Acetylglutamate kinase; Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids.	3-octaprenyl-4-hydroxybenzoate carboxy-lyase.	0.937
bsdB	KZX10976.1	MBFIL_11270	MBFIL_15880	Phenolic acid decarboxylase subunit B; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.	Hypothetical protein; Belongs to the UPF0107 family.	0.500
bsdB	KZX11689.1	MBFIL_11270	MBFIL_13340	Phenolic acid decarboxylase subunit B; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.	GMC oxidoreductase.	0.441
bsdB	KZX12522.1	MBFIL_11270	MBFIL_11260	Phenolic acid decarboxylase subunit B; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.	Deoxyguanosinetriphosphate triphosphohydrolase-like protein.	0.860
bsdB	argB_2	MBFIL_11270	MBFIL_11060	Phenolic acid decarboxylase subunit B; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.	Acetylglutamate kinase; Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids.	0.937
bsdB	cyoE	MBFIL_11270	MBFIL_19520	Phenolic acid decarboxylase subunit B; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.	Protoheme IX farnesyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids.	0.615
bsdB	gapN	MBFIL_11270	MBFIL_02580	Phenolic acid decarboxylase subunit B; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.499
bsdB	lcfB_1	MBFIL_11270	MBFIL_04480	Phenolic acid decarboxylase subunit B; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.	long-chain-fatty-acid--CoA ligase.	0.433