rny protein (Methanobrevibacter filiformis) - STRING interaction network

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[Homology]

Score

rny

Ribonuclease Y. (162 aa)

Predicted Functional Partners:

KZX09886.1

0.969

tfe

0.848

KZX14936.1

0.671

KZX11416.1

0.536

prcB

0.508

mobB

0.486

ndk

0.482

fbiB_3

0.479

KZX11002.1

0.449

mobA_1

0.447

Your Current Organism:

Methanobrevibacter filiformis

NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KZX09886.1	KZX14936.1	MBFIL_19610	MBFIL_07590	tRNA 2'-O-methylase; Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family.	Carbamoyl phosphate synthase-like protein.	0.671
KZX09886.1	rny	MBFIL_19610	MBFIL_14580	tRNA 2'-O-methylase; Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family.	Ribonuclease Y.	0.969
KZX09886.1	tfe	MBFIL_19610	MBFIL_14590	tRNA 2'-O-methylase; Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family.	Transcription initiation factor E subunit alpha; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elo [...]	0.786
KZX11002.1	KZX11416.1	MBFIL_15740	MBFIL_14570	NMD3 family protein.	PUA domain protein.	0.698
KZX11002.1	KZX14936.1	MBFIL_15740	MBFIL_07590	NMD3 family protein.	Carbamoyl phosphate synthase-like protein.	0.714
KZX11002.1	rny	MBFIL_15740	MBFIL_14580	NMD3 family protein.	Ribonuclease Y.	0.449
KZX11002.1	tfe	MBFIL_15740	MBFIL_14590	NMD3 family protein.	Transcription initiation factor E subunit alpha; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elo [...]	0.503
KZX11416.1	KZX11002.1	MBFIL_14570	MBFIL_15740	PUA domain protein.	NMD3 family protein.	0.698
KZX11416.1	rny	MBFIL_14570	MBFIL_14580	PUA domain protein.	Ribonuclease Y.	0.536
KZX14936.1	KZX09886.1	MBFIL_07590	MBFIL_19610	Carbamoyl phosphate synthase-like protein.	tRNA 2'-O-methylase; Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family.	0.671
KZX14936.1	KZX11002.1	MBFIL_07590	MBFIL_15740	Carbamoyl phosphate synthase-like protein.	NMD3 family protein.	0.714
KZX14936.1	rny	MBFIL_07590	MBFIL_14580	Carbamoyl phosphate synthase-like protein.	Ribonuclease Y.	0.671
KZX14936.1	tfe	MBFIL_07590	MBFIL_14590	Carbamoyl phosphate synthase-like protein.	Transcription initiation factor E subunit alpha; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elo [...]	0.671
fbiB_3	rny	MBFIL_14600	MBFIL_14580	Coenzyme F420:L-glutamate ligase.	Ribonuclease Y.	0.479
fbiB_3	tfe	MBFIL_14600	MBFIL_14590	Coenzyme F420:L-glutamate ligase.	Transcription initiation factor E subunit alpha; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elo [...]	0.419
mobA_1	mobB	MBFIL_11300	MBFIL_01840	Molybdenum cofactor guanylyltransferase.	Molybdopterin-guanine dinucleotide biosynthesis adapter protein.	0.958
mobA_1	ndk	MBFIL_11300	MBFIL_16780	Molybdenum cofactor guanylyltransferase.	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.	0.411
mobA_1	rny	MBFIL_11300	MBFIL_14580	Molybdenum cofactor guanylyltransferase.	Ribonuclease Y.	0.447
mobB	mobA_1	MBFIL_01840	MBFIL_11300	Molybdopterin-guanine dinucleotide biosynthesis adapter protein.	Molybdenum cofactor guanylyltransferase.	0.958
mobB	prcB	MBFIL_01840	MBFIL_02700	Molybdopterin-guanine dinucleotide biosynthesis adapter protein.	Proteasome subunit beta precursor; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.	0.620