Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KZX11049.1Carboxymuconolactone decarboxylase family protein. (106 aa)    
Predicted Functional Partners:
dfx
Desulfoferrodoxin.
  
  
 0.709
KZX17318.1
MTH865-like family protein.
 
    0.694
purB
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
 
 
 0.668
KZX17300.1
Methyl-coenzyme M reductase operon protein C.
 
     0.594
KZX10088.1
Hypothetical protein.
 
     0.581
KZX10089.1
Hypothetical protein.
 
    0.579
fldI
R-phenyllactate dehydratase activator.
 
     0.559
KZX17553.1
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase.
    
 0.531
copA_1
Putative copper-importing P-type ATPase A.
 
     0.531
KZX10381.1
Carboxymuconolactone decarboxylase family protein.
     
  0.522
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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