Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tagF_3CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase. (394 aa)    
Predicted Functional Partners:
epsH_2
Putative glycosyltransferase EpsH.
  
 0.895
epsH_4
Putative glycosyltransferase EpsH.
  
 0.863
spsI
Bifunctional IPC transferase and DIPP synthase.
 
  
 0.789
tagB
Putative CDP-glycerol:glycerophosphate glycerophosphotransferase.
 
    
0.669
pglJ
N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase.
  
 0.651
KZX17288.1
Hypothetical protein.
  
     0.613
KZX17047.1
Hypothetical protein.
  
     0.613
epsH_3
Putative glycosyltransferase EpsH.
  
 0.567
epsJ
Putative glycosyltransferase EpsJ.
  
0.500
tagF_2
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
 
  
0.487
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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