STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZX10778.1NMT1/THI5 like protein. (351 aa)    
Predicted Functional Partners:
cmpB
Bicarbonate transport system permease protein CmpB.
 
 
 0.866
ssuC_2
Putative aliphatic sulfonates transport permease protein SsuC.
 
 
 0.850
cmpD_2
Bicarbonate transport ATP-binding protein CmpD.
 
 
 0.819
vnfD_2
Nitrogenase vanadium-iron protein alpha chain.
 
  
 0.728
cmpD_1
Bicarbonate transport ATP-binding protein CmpD.
 
 
 0.716
ssuC_1
Putative aliphatic sulfonates transport permease protein SsuC.
 
 
 0.706
nifD_4
Nitrogenase molybdenum-iron protein alpha chain.
 
  
 0.706
cmpD_3
Bicarbonate transport ATP-binding protein CmpD.
 
 
 0.700
anfK_1
Nitrogenase iron-iron protein beta chain.
 
  
 0.685
anfK_2
Nitrogenase iron-iron protein beta chain.
 
  
 0.680
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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