spt4 protein (Methanobrevibacter filiformis)

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Score

spt4

DNA-directed RNA polymerase subunit E'; Stimulates transcription elongation; Belongs to the archaeal Spt4 family. (60 aa)

Predicted Functional Partners:

rps1

0.997

spt5

0.990

rps27ae

0.974

KZX11393.1

0.895

KZX10679.1

0.893

rpoC_1

0.890

rpoC_2

0.884

rpoH

0.882

rpoB_1

0.879

rpoK

0.874

Your Current Organism:

Methanobrevibacter filiformis

NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KZX10679.1	rps1	MBFIL_16700	MBFIL_16720	Hypothetical protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).	30S ribosomal protein S1.	0.963
KZX10679.1	rps27ae	MBFIL_16700	MBFIL_16680	Hypothetical protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).	30S ribosomal protein S27ae; Belongs to the eukaryotic ribosomal protein eS31 family.	0.922
KZX10679.1	spt4	MBFIL_16700	MBFIL_16710	Hypothetical protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).	DNA-directed RNA polymerase subunit E'; Stimulates transcription elongation; Belongs to the archaeal Spt4 family.	0.893
KZX10679.1	spt5	MBFIL_16700	MBFIL_14650	Hypothetical protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).	Hypothetical protein; Stimulates transcription elongation; Belongs to the archaeal Spt5 family.	0.520
KZX11393.1	rpoB_1	MBFIL_14770	MBFIL_04890	DNA-directed RNA polymerase subunit L.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.973
KZX11393.1	rpoC_1	MBFIL_14770	MBFIL_04870	DNA-directed RNA polymerase subunit L.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.983
KZX11393.1	rpoC_2	MBFIL_14770	MBFIL_04880	DNA-directed RNA polymerase subunit L.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.983
KZX11393.1	rpoH	MBFIL_14770	MBFIL_04910	DNA-directed RNA polymerase subunit L.	DNA-directed RNA polymerase subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family.	0.996
KZX11393.1	rpoK	MBFIL_14770	MBFIL_14000	DNA-directed RNA polymerase subunit L.	DNA-directed RNA polymerase subunit K; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family.	0.994
KZX11393.1	rps1	MBFIL_14770	MBFIL_16720	DNA-directed RNA polymerase subunit L.	30S ribosomal protein S1.	0.976
KZX11393.1	spt4	MBFIL_14770	MBFIL_16710	DNA-directed RNA polymerase subunit L.	DNA-directed RNA polymerase subunit E'; Stimulates transcription elongation; Belongs to the archaeal Spt4 family.	0.895
KZX11393.1	spt5	MBFIL_14770	MBFIL_14650	DNA-directed RNA polymerase subunit L.	Hypothetical protein; Stimulates transcription elongation; Belongs to the archaeal Spt5 family.	0.883
rpoB_1	KZX11393.1	MBFIL_04890	MBFIL_14770	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit L.	0.973
rpoB_1	rpoC_1	MBFIL_04890	MBFIL_04870	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB_1	rpoC_2	MBFIL_04890	MBFIL_04880	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB_1	rpoH	MBFIL_04890	MBFIL_04910	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family.	0.995
rpoB_1	rpoK	MBFIL_04890	MBFIL_14000	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit K; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family.	0.988
rpoB_1	rps1	MBFIL_04890	MBFIL_16720	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	30S ribosomal protein S1.	0.965
rpoB_1	spt4	MBFIL_04890	MBFIL_16710	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit E'; Stimulates transcription elongation; Belongs to the archaeal Spt4 family.	0.879
rpoB_1	spt5	MBFIL_04890	MBFIL_14650	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Hypothetical protein; Stimulates transcription elongation; Belongs to the archaeal Spt5 family.	0.965