rps28e protein (Methanobrevibacter filiformis)

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Score

rps28e

30S ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family. (68 aa)

Predicted Functional Partners:

rpsI

0.999

rplM

0.999

rps6e

0.999

rpl24e

0.999

rpl7ae

0.999

rpsO

0.998

rps19e

0.998

rpsS

0.998

rpsC

0.998

rpsQ

0.998

Your Current Organism:

Methanobrevibacter filiformis

NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rpl24e	rpl7ae	MBFIL_16790	MBFIL_16810	50S ribosomal protein L24e; Binds to the 23S rRNA.	Putative ribosomal protein L7Ae-like protein; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	0.999
rpl24e	rplM	MBFIL_16790	MBFIL_14030	50S ribosomal protein L24e; Binds to the 23S rRNA.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rpl24e	rps19e	MBFIL_16790	MBFIL_05530	50S ribosomal protein L24e; Binds to the 23S rRNA.	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.994
rpl24e	rps28e	MBFIL_16790	MBFIL_16800	50S ribosomal protein L24e; Binds to the 23S rRNA.	30S ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.	0.999
rpl24e	rps6e	MBFIL_16790	MBFIL_16760	50S ribosomal protein L24e; Binds to the 23S rRNA.	30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.998
rpl24e	rpsC	MBFIL_16790	MBFIL_16390	50S ribosomal protein L24e; Binds to the 23S rRNA.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.985
rpl24e	rpsI	MBFIL_16790	MBFIL_14020	50S ribosomal protein L24e; Binds to the 23S rRNA.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rpl24e	rpsO	MBFIL_16790	MBFIL_02980	50S ribosomal protein L24e; Binds to the 23S rRNA.	30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.983
rpl24e	rpsQ	MBFIL_16790	MBFIL_16430	50S ribosomal protein L24e; Binds to the 23S rRNA.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.986
rpl24e	rpsS	MBFIL_16790	MBFIL_16370	50S ribosomal protein L24e; Binds to the 23S rRNA.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.985
rpl7ae	rpl24e	MBFIL_16810	MBFIL_16790	Putative ribosomal protein L7Ae-like protein; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	50S ribosomal protein L24e; Binds to the 23S rRNA.	0.999
rpl7ae	rplM	MBFIL_16810	MBFIL_14030	Putative ribosomal protein L7Ae-like protein; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rpl7ae	rps19e	MBFIL_16810	MBFIL_05530	Putative ribosomal protein L7Ae-like protein; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.999
rpl7ae	rps28e	MBFIL_16810	MBFIL_16800	Putative ribosomal protein L7Ae-like protein; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	30S ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.	0.999
rpl7ae	rps6e	MBFIL_16810	MBFIL_16760	Putative ribosomal protein L7Ae-like protein; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
rpl7ae	rpsC	MBFIL_16810	MBFIL_16390	Putative ribosomal protein L7Ae-like protein; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.998
rpl7ae	rpsI	MBFIL_16810	MBFIL_14020	Putative ribosomal protein L7Ae-like protein; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rpl7ae	rpsO	MBFIL_16810	MBFIL_02980	Putative ribosomal protein L7Ae-like protein; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.996
rpl7ae	rpsQ	MBFIL_16810	MBFIL_16430	Putative ribosomal protein L7Ae-like protein; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.997
rpl7ae	rpsS	MBFIL_16810	MBFIL_16370	Putative ribosomal protein L7Ae-like protein; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.997