Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KZX10551.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
era
GTPase Era.
 
   
 0.984
hxlB
3-hexulose-6-phosphate isomerase.
       0.659
KZX10709.1
Hypothetical protein.
     
 0.635
gloB
Hydroxyacylglutathione hydrolase; Belongs to the UPF0173 family.
       0.597
KZX11698.1
Hypothetical protein.
  
     0.537
KZX13497.1
Kinase binding protein CGI-121.
  
     0.529
impdh_2
Inosine-5'-monophosphate dehydrogenase.
  
     0.522
KZX17339.1
Hypothetical protein.
  
     0.504
KZX15376.1
MarR family protein.
  
     0.496
KZX12635.1
Hypothetical protein.
  
     0.481
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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