STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KZX10560.1Putative cation efflux system proteinc. (218 aa)    
Predicted Functional Partners:
nhaP
K(+)/H(+) antiporter NhaP.
     
 0.744
asnB
Asparagine synthetase B.
       0.736
patA
Putative N-acetyl-LL-diaminopimelate aminotransferase.
     
 0.471
KZX10106.1
Methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase.
    
 0.446
czcD
Cobalt-zinc-cadmium resistance protein CzcD.
  
 
 0.431
cadA
Putative cadmium-transporting ATPase.
 
 
 0.428
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.