Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KZX09878.1Hypothetical protein. (449 aa)    
Predicted Functional Partners:
cyoE
Protoheme IX farnesyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids.
 
   
 0.722
hddC
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
  
 0.492
KZX11584.1
Polysaccharide biosynthesis protein.
 
 
 0.491
KZX14227.1
CAAX amino terminal protease self- immunity.
 
   
 0.489
wcaJ
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
 
 0.475
recQ
ATP-dependent DNA helicase RecQ.
    
 
 0.469
wbpI
UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase.
 
 
 0.461
KZX17106.1
UDP-glucose 4-epimerase.
 
 
 0.454
glmM_1
Phosphoglucosamine mutase; Belongs to the phosphohexose mutase family.
 
 
 0.448
asnB
Asparagine synthetase B.
 
  
 0.414
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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