Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KZX09884.1Phosphatidylglycerophosphatase A. (392 aa)    
Predicted Functional Partners:
cobS
Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
   
 0.926
KZX09886.1
tRNA 2'-O-methylase; Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family.
 
     0.903
cbiB
Cobalamin biosynthesis protein CbiB.
    
 0.738
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase.
 
     0.716
KZX10085.1
Hypothetical protein.
  
     0.618
KZX17053.1
Hypothetical protein; Belongs to the UPF0284 family.
 
     0.592
KZX17497.1
CDP-alcohol phosphatidyltransferase.
  
 
 0.570
KZX10087.1
Hypothetical protein; Belongs to the UPF0288 family.
  
     0.561
dpnC
Type-2 restriction enzyme DpnI.
     
 0.547
KZX11641.1
Methyl-coenzyme M reductase operon protein D.
  
     0.537
Your Current Organism:
Methanobrevibacter filiformis
NCBI taxonomy Id: 55758
Other names: DSM 11501, M. filiformis, strain RFM-3
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