Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHK_00032 | LHK_00033 | LHK_00032 | LHK_00033 | Twitching motility protein; PilT. | Ala_racemase_N domain containing protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.606 |
LHK_00032 | LHK_00035 | LHK_00032 | LHK_00035 | Twitching motility protein; PilT. | Hypothetical protein. | 0.556 |
LHK_00032 | LHK_00644 | LHK_00032 | LHK_00644 | Twitching motility protein; PilT. | ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2; Competence protein. | 0.609 |
LHK_00032 | LHK_01054 | LHK_00032 | LHK_01054 | Twitching motility protein; PilT. | Bacterial type II secretion system protein. | 0.882 |
LHK_00032 | LHK_01055 | LHK_00032 | LHK_01055 | Twitching motility protein; PilT. | Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB. | 0.632 |
LHK_00032 | LHK_01057 | LHK_00032 | LHK_01057 | Twitching motility protein; PilT. | Type II and III secretion system protein; Type II secretory pathway, component PulD. | 0.590 |
LHK_00032 | lep4 | LHK_00032 | LHK_00663 | Twitching motility protein; PilT. | Lep4; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.880 |
LHK_00032 | proC | LHK_00032 | LHK_00034 | Twitching motility protein; PilT. | ProC; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.556 |
LHK_00033 | LHK_00032 | LHK_00033 | LHK_00032 | Ala_racemase_N domain containing protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Twitching motility protein; PilT. | 0.606 |
LHK_00033 | LHK_00035 | LHK_00033 | LHK_00035 | Ala_racemase_N domain containing protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Hypothetical protein. | 0.904 |
LHK_00033 | proC | LHK_00033 | LHK_00034 | Ala_racemase_N domain containing protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | ProC; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.912 |
LHK_00035 | LHK_00032 | LHK_00035 | LHK_00032 | Hypothetical protein. | Twitching motility protein; PilT. | 0.556 |
LHK_00035 | LHK_00033 | LHK_00035 | LHK_00033 | Hypothetical protein. | Ala_racemase_N domain containing protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.904 |
LHK_00035 | proC | LHK_00035 | LHK_00034 | Hypothetical protein. | ProC; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.860 |
LHK_00644 | LHK_00032 | LHK_00644 | LHK_00032 | ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2; Competence protein. | Twitching motility protein; PilT. | 0.609 |
LHK_00644 | LHK_01054 | LHK_00644 | LHK_01054 | ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2; Competence protein. | Bacterial type II secretion system protein. | 0.803 |
LHK_00644 | LHK_01055 | LHK_00644 | LHK_01055 | ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2; Competence protein. | Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB. | 0.721 |
LHK_00644 | lep4 | LHK_00644 | LHK_00663 | ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2; Competence protein. | Lep4; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.797 |
LHK_00644 | proC | LHK_00644 | LHK_00034 | ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2; Competence protein. | ProC; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.532 |
LHK_01054 | LHK_00032 | LHK_01054 | LHK_00032 | Bacterial type II secretion system protein. | Twitching motility protein; PilT. | 0.882 |
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