Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHK_00144 | LHK_00146 | LHK_00144 | LHK_00146 | DUF143 domain containing protein. | Putative PhnA-like phosphonoacetate hydrolase; Similar to alkylphosphonate uptake protein PhnA. | 0.552 |
LHK_00144 | LHK_00147 | LHK_00144 | LHK_00147 | DUF143 domain containing protein. | Methylated-DNA--protein-cysteine methyltransferase. | 0.561 |
LHK_00144 | rlmH | LHK_00144 | LHK_00145 | DUF143 domain containing protein. | Uncharacterized conserved protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.960 |
LHK_00146 | LHK_00144 | LHK_00146 | LHK_00144 | Putative PhnA-like phosphonoacetate hydrolase; Similar to alkylphosphonate uptake protein PhnA. | DUF143 domain containing protein. | 0.552 |
LHK_00146 | LHK_00147 | LHK_00146 | LHK_00147 | Putative PhnA-like phosphonoacetate hydrolase; Similar to alkylphosphonate uptake protein PhnA. | Methylated-DNA--protein-cysteine methyltransferase. | 0.784 |
LHK_00146 | rlmH | LHK_00146 | LHK_00145 | Putative PhnA-like phosphonoacetate hydrolase; Similar to alkylphosphonate uptake protein PhnA. | Uncharacterized conserved protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.573 |
LHK_00147 | LHK_00144 | LHK_00147 | LHK_00144 | Methylated-DNA--protein-cysteine methyltransferase. | DUF143 domain containing protein. | 0.561 |
LHK_00147 | LHK_00146 | LHK_00147 | LHK_00146 | Methylated-DNA--protein-cysteine methyltransferase. | Putative PhnA-like phosphonoacetate hydrolase; Similar to alkylphosphonate uptake protein PhnA. | 0.784 |
LHK_00147 | rlmH | LHK_00147 | LHK_00145 | Methylated-DNA--protein-cysteine methyltransferase. | Uncharacterized conserved protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.574 |
rlmH | LHK_00144 | LHK_00145 | LHK_00144 | Uncharacterized conserved protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | DUF143 domain containing protein. | 0.960 |
rlmH | LHK_00146 | LHK_00145 | LHK_00146 | Uncharacterized conserved protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | Putative PhnA-like phosphonoacetate hydrolase; Similar to alkylphosphonate uptake protein PhnA. | 0.573 |
rlmH | LHK_00147 | LHK_00145 | LHK_00147 | Uncharacterized conserved protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | Methylated-DNA--protein-cysteine methyltransferase. | 0.574 |