STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHK_00176Putative transmembrane protein. (165 aa)    
Predicted Functional Partners:
LHK_00177
Putative cytochrome aa3 oxidase assembly protein.
 
 
 0.958
coxB
CoxB; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.956
LHK_00175
Hypothetical protein.
 
  
 0.911
coxG
CoxG; Cytochrome c oxidase assembly protein CtaG/Cox11.
 
 
 0.857
ctaB
CtaB; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
  
 0.781
dsbE
DsbE; Thioredoxin-related transmembrane protein.
 
 
 0.760
LHK_02476
Thioredoxin domain precursor.
  
 
 0.704
LHK_00173
Cytochrome c oxidase, subunit III.
 
  
 0.659
LHK_00154
Hypothetical protein.
  
     0.651
LHK_02944
Putative transmembrane protein.
  
     0.644
Your Current Organism:
Laribacter hongkongensis
NCBI taxonomy Id: 557598
Other names: L. hongkongensis HLHK9, Laribacter hongkongensis HLHK9, Laribacter hongkongensis str. HLHK9, Laribacter hongkongensis strain HLHK9
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