Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHK_00391 | LHK_00414 | LHK_00391 | LHK_00414 | Phage P2 GpU. | Fels-2 prophage protein. | 0.944 |
LHK_00391 | LHK_00416 | LHK_00391 | LHK_00416 | Phage P2 GpU. | Terminase small subunit. | 0.912 |
LHK_00391 | LHK_00417 | LHK_00391 | LHK_00417 | Phage P2 GpU. | Phage major capsid protein, P2 family similar to Xoo1607. | 0.909 |
LHK_00391 | LHK_00418 | LHK_00391 | LHK_00418 | Phage P2 GpU. | Phage capsid scaffolding. | 0.902 |
LHK_00391 | LHK_00419 | LHK_00391 | LHK_00419 | Phage P2 GpU. | Terminase. | 0.896 |
LHK_00391 | LHK_00420 | LHK_00391 | LHK_00420 | Phage P2 GpU. | Bacteriophage gpQ. | 0.911 |
LHK_00391 | LHK_02579 | LHK_00391 | LHK_02579 | Phage P2 GpU. | Bacteriophage gpQ. | 0.900 |
LHK_00391 | LHK_02584 | LHK_00391 | LHK_02584 | Phage P2 GpU. | Phage major capsid protein, P2 family similar to Xoo1607. | 0.898 |
LHK_00391 | gpl-1 | LHK_00391 | LHK_00415 | Phage P2 GpU. | Gpl; Head completion protein. | 0.914 |
LHK_00391 | gpl-2 | LHK_00391 | LHK_02586 | Phage P2 GpU. | Gpl; Head completion protein. | 0.902 |
LHK_00414 | LHK_00391 | LHK_00414 | LHK_00391 | Fels-2 prophage protein. | Phage P2 GpU. | 0.944 |
LHK_00414 | LHK_00416 | LHK_00414 | LHK_00416 | Fels-2 prophage protein. | Terminase small subunit. | 0.954 |
LHK_00414 | LHK_00417 | LHK_00414 | LHK_00417 | Fels-2 prophage protein. | Phage major capsid protein, P2 family similar to Xoo1607. | 0.953 |
LHK_00414 | LHK_00418 | LHK_00414 | LHK_00418 | Fels-2 prophage protein. | Phage capsid scaffolding. | 0.950 |
LHK_00414 | LHK_00419 | LHK_00414 | LHK_00419 | Fels-2 prophage protein. | Terminase. | 0.922 |
LHK_00414 | LHK_00420 | LHK_00414 | LHK_00420 | Fels-2 prophage protein. | Bacteriophage gpQ. | 0.931 |
LHK_00414 | LHK_02579 | LHK_00414 | LHK_02579 | Fels-2 prophage protein. | Bacteriophage gpQ. | 0.895 |
LHK_00414 | LHK_02584 | LHK_00414 | LHK_02584 | Fels-2 prophage protein. | Phage major capsid protein, P2 family similar to Xoo1607. | 0.903 |
LHK_00414 | gpl-1 | LHK_00414 | LHK_00415 | Fels-2 prophage protein. | Gpl; Head completion protein. | 0.978 |
LHK_00414 | gpl-2 | LHK_00414 | LHK_02586 | Fels-2 prophage protein. | Gpl; Head completion protein. | 0.910 |
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