STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheV2-1CheV2; Chemotaxis protein CheV. (313 aa)    
Predicted Functional Partners:
LHK_00554
Probable chemotaxis protein CheA.
 0.996
LHK_01015
Sensor protein.
  
 
 0.994
LHK_02433
Probable chemotaxis protein CheA.
 0.994
cheA
CheA; Chemotaxis protein CheA.
 
 0.991
LHK_00105
Sensor protein.
  
 
 0.990
cheV1-1
CheV1; Chemotaxis protein CheV.
 
 
0.967
cheY3-1
CheY3; Chemotaxis regulator protein CheY.
 
 
 0.955
aer-2
Aerotaxis receptor Aer-2.
 
 
 0.933
cheY3-3
CheY3; Chemotaxis regulator protein CheY.
 
 
 0.918
LHK_03124
Predicted signal transduction protein.
  
 
 0.909
Your Current Organism:
Laribacter hongkongensis
NCBI taxonomy Id: 557598
Other names: L. hongkongensis HLHK9, Laribacter hongkongensis HLHK9, Laribacter hongkongensis str. HLHK9, Laribacter hongkongensis strain HLHK9
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