STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHK_00743Probable multidrug translocase protein. (422 aa)    
Predicted Functional Partners:
LHK_01870
Multidrug resistence transmembrane protein.
  
   
 0.800
emrR
EmrR; Transcriptional repressor emr operon, MarR family.
 
   
 0.769
emrB
EmrB; Multidrug resistance protein B; Belongs to the major facilitator superfamily.
  
   
 0.617
LHK_01373
Probable multidrug resistance protein; Belongs to the major facilitator superfamily.
  
   
 0.611
pagP
PagP protein; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.
  
     0.557
sym
Sym; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.552
LHK_00742
Hypothetical protein.
       0.505
LHK_02975
Probable MFS transporter.
  
   
0.477
gltB
GltB; Glutamate synthase, large subunit.
      
 0.410
LHK_00842
DUF1615 domain containing protein.
  
     0.409
Your Current Organism:
Laribacter hongkongensis
NCBI taxonomy Id: 557598
Other names: L. hongkongensis HLHK9, Laribacter hongkongensis HLHK9, Laribacter hongkongensis str. HLHK9, Laribacter hongkongensis strain HLHK9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.