STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHK_00825Cellulose-binding domain protein. (655 aa)    
Predicted Functional Partners:
LHK_00831
Polysaccharide biosynthesis protein.
 
   
 0.858
LHK_00828
Glycosyl transferase, group 2 family protein.
 
     0.817
LHK_00829
Glycosyl transferase, group 1 family protein.
 
   
 0.804
LHK_00826
Hypothetical protein.
       0.752
LHK_00830
Glycosyl transferase, group 2 family.
 
     0.713
ftsK
FtsK; Cell division ftsk transmembrane protein.
   
 
 0.703
LHK_00833
Teichoic acid biosynthesis protein; Belongs to the glycosyltransferase 26 family.
 
     0.639
acpP
AcpP; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.636
LHK_00832
Glycosyl transferase, group 1 family protein.
 
   
 0.606
LHK_01081
NosA protein precursor.
    
 
 0.588
Your Current Organism:
Laribacter hongkongensis
NCBI taxonomy Id: 557598
Other names: L. hongkongensis HLHK9, Laribacter hongkongensis HLHK9, Laribacter hongkongensis str. HLHK9, Laribacter hongkongensis strain HLHK9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.