Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHK_00825 | LHK_00826 | LHK_00825 | LHK_00826 | Cellulose-binding domain protein. | Hypothetical protein. | 0.752 |
LHK_00825 | LHK_00828 | LHK_00825 | LHK_00828 | Cellulose-binding domain protein. | Glycosyl transferase, group 2 family protein. | 0.817 |
LHK_00825 | LHK_00829 | LHK_00825 | LHK_00829 | Cellulose-binding domain protein. | Glycosyl transferase, group 1 family protein. | 0.804 |
LHK_00825 | LHK_00830 | LHK_00825 | LHK_00830 | Cellulose-binding domain protein. | Glycosyl transferase, group 2 family. | 0.713 |
LHK_00825 | LHK_00831 | LHK_00825 | LHK_00831 | Cellulose-binding domain protein. | Polysaccharide biosynthesis protein. | 0.858 |
LHK_00825 | LHK_00832 | LHK_00825 | LHK_00832 | Cellulose-binding domain protein. | Glycosyl transferase, group 1 family protein. | 0.606 |
LHK_00825 | LHK_00833 | LHK_00825 | LHK_00833 | Cellulose-binding domain protein. | Teichoic acid biosynthesis protein; Belongs to the glycosyltransferase 26 family. | 0.639 |
LHK_00825 | LHK_01081 | LHK_00825 | LHK_01081 | Cellulose-binding domain protein. | NosA protein precursor. | 0.588 |
LHK_00825 | acpP | LHK_00825 | LHK_00569 | Cellulose-binding domain protein. | AcpP; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.636 |
LHK_00825 | ftsK | LHK_00825 | LHK_02403 | Cellulose-binding domain protein. | FtsK; Cell division ftsk transmembrane protein. | 0.703 |
LHK_00826 | LHK_00825 | LHK_00826 | LHK_00825 | Hypothetical protein. | Cellulose-binding domain protein. | 0.752 |
LHK_00826 | LHK_00828 | LHK_00826 | LHK_00828 | Hypothetical protein. | Glycosyl transferase, group 2 family protein. | 0.558 |
LHK_00826 | LHK_00829 | LHK_00826 | LHK_00829 | Hypothetical protein. | Glycosyl transferase, group 1 family protein. | 0.555 |
LHK_00826 | LHK_00830 | LHK_00826 | LHK_00830 | Hypothetical protein. | Glycosyl transferase, group 2 family. | 0.555 |
LHK_00826 | LHK_00831 | LHK_00826 | LHK_00831 | Hypothetical protein. | Polysaccharide biosynthesis protein. | 0.560 |
LHK_00826 | LHK_00832 | LHK_00826 | LHK_00832 | Hypothetical protein. | Glycosyl transferase, group 1 family protein. | 0.541 |
LHK_00826 | LHK_00833 | LHK_00826 | LHK_00833 | Hypothetical protein. | Teichoic acid biosynthesis protein; Belongs to the glycosyltransferase 26 family. | 0.544 |
LHK_00828 | LHK_00825 | LHK_00828 | LHK_00825 | Glycosyl transferase, group 2 family protein. | Cellulose-binding domain protein. | 0.817 |
LHK_00828 | LHK_00826 | LHK_00828 | LHK_00826 | Glycosyl transferase, group 2 family protein. | Hypothetical protein. | 0.558 |
LHK_00828 | LHK_00829 | LHK_00828 | LHK_00829 | Glycosyl transferase, group 2 family protein. | Glycosyl transferase, group 1 family protein. | 0.955 |
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