Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHK_00752 | LHK_00876 | LHK_00752 | LHK_00876 | Lactoylglutathione lyase. | Putative metallo-beta-lactamase family protein. | 0.926 |
LHK_00752 | gloB | LHK_00752 | LHK_00878 | Lactoylglutathione lyase. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.972 |
LHK_00876 | LHK_00752 | LHK_00876 | LHK_00752 | Putative metallo-beta-lactamase family protein. | Lactoylglutathione lyase. | 0.926 |
LHK_00876 | LHK_00962 | LHK_00876 | LHK_00962 | Putative metallo-beta-lactamase family protein. | Putative oxidoreductase. | 0.903 |
LHK_00876 | LHK_02131 | LHK_00876 | LHK_02131 | Putative metallo-beta-lactamase family protein. | RND efflux system, outer membrane lipoprotein, NodT family precursor. | 0.608 |
LHK_00876 | LHK_02827 | LHK_00876 | LHK_02827 | Putative metallo-beta-lactamase family protein. | Probable transport/efflux transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.611 |
LHK_00876 | ampC | LHK_00876 | LHK_03028 | Putative metallo-beta-lactamase family protein. | AmpC; Beta-lactamase. | 0.726 |
LHK_00876 | gloB | LHK_00876 | LHK_00878 | Putative metallo-beta-lactamase family protein. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.932 |
LHK_00876 | hldD | LHK_00876 | LHK_00875 | Putative metallo-beta-lactamase family protein. | HldD; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. | 0.779 |
LHK_00876 | lapB | LHK_00876 | LHK_00872 | Putative metallo-beta-lactamase family protein. | Hypothetical protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family. | 0.741 |
LHK_00876 | pyrF | LHK_00876 | LHK_00873 | Putative metallo-beta-lactamase family protein. | PyrF; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.763 |
LHK_00876 | rfaE | LHK_00876 | LHK_00874 | Putative metallo-beta-lactamase family protein. | RfaE; ADP-heptose synthase. | 0.779 |
LHK_00962 | LHK_00876 | LHK_00962 | LHK_00876 | Putative oxidoreductase. | Putative metallo-beta-lactamase family protein. | 0.903 |
LHK_00962 | gloB | LHK_00962 | LHK_00878 | Putative oxidoreductase. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.903 |
LHK_02131 | LHK_00876 | LHK_02131 | LHK_00876 | RND efflux system, outer membrane lipoprotein, NodT family precursor. | Putative metallo-beta-lactamase family protein. | 0.608 |
LHK_02131 | LHK_02827 | LHK_02131 | LHK_02827 | RND efflux system, outer membrane lipoprotein, NodT family precursor. | Probable transport/efflux transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.785 |
LHK_02131 | ampC | LHK_02131 | LHK_03028 | RND efflux system, outer membrane lipoprotein, NodT family precursor. | AmpC; Beta-lactamase. | 0.528 |
LHK_02827 | LHK_00876 | LHK_02827 | LHK_00876 | Probable transport/efflux transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Putative metallo-beta-lactamase family protein. | 0.611 |
LHK_02827 | LHK_02131 | LHK_02827 | LHK_02131 | Probable transport/efflux transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | RND efflux system, outer membrane lipoprotein, NodT family precursor. | 0.785 |
LHK_02827 | ampC | LHK_02827 | LHK_03028 | Probable transport/efflux transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | AmpC; Beta-lactamase. | 0.527 |
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