STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHK_00990enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (261 aa)    
Predicted Functional Partners:
LHK_00989
3-hydroxyacyl-CoA dehydrogenase family protein.
 0.999
LHK_00208
3-hydroxybutyryl-CoA dehydrogenase.
 0.997
LHK_00992
acyl-CoA dehydrogenase, short chain specific.
 0.984
LHK_02055
Probable isovaleryl-CoA dehydrogenase.
 0.968
LHK_02894
Probable glutaryl-CoA dehydrogenase.
 
 0.959
LHK_02914
Probable maoC-like dehydratase.
 
 0.941
LHK_02056
Probable propionyl-CoA carboxylase.
  
 0.939
fadB
FadB; 3-hydroxyacyl-CoA dehydrogenase.
0.927
LHK_01857
Probable enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 
0.923
dcaF
DcaF; Acetyl-CoA acyltransferase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.896
Your Current Organism:
Laribacter hongkongensis
NCBI taxonomy Id: 557598
Other names: L. hongkongensis HLHK9, Laribacter hongkongensis HLHK9, Laribacter hongkongensis str. HLHK9, Laribacter hongkongensis strain HLHK9
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