STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHK_01100Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (541 aa)    
Predicted Functional Partners:
dppC2
DppC2; Binding-protein-dependent transport systems inner membrane component.
  
 0.996
dppC
DppC; Dipeptide transport system permease protein.
  
 0.982
LHK_01097
ABC peptide transporter, inner membrane subunit; Binding-protein-dependent transport systems inner membrane component.
  
 0.969
dppB
DppB; Dipeptide transport system permease protein.
  
 0.906
LHK_02060
Extracellular solute-binding protein, family 5; Putative oligopeptide transport protein.
 
  
 0.795
LHK_01098
Diguanylate cyclase.
       0.773
gadC
GadC; APC family amino acid-polyamine-organocation transporter glutamate:gamma-aminobutyrate antiporter.
       0.471
dppD
DppD; Probable ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily.
 
 
  
0.460
Your Current Organism:
Laribacter hongkongensis
NCBI taxonomy Id: 557598
Other names: L. hongkongensis HLHK9, Laribacter hongkongensis HLHK9, Laribacter hongkongensis str. HLHK9, Laribacter hongkongensis strain HLHK9
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