Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHK_00711 | LHK_00822 | LHK_00711 | LHK_00822 | GGDEF domain protein. | Putative PAS/PAC sensor protein. | 0.965 |
LHK_00711 | LHK_01015 | LHK_00711 | LHK_01015 | GGDEF domain protein. | Sensor protein. | 0.955 |
LHK_00711 | LHK_01126 | LHK_00711 | LHK_01126 | GGDEF domain protein. | EAL domain protein. | 0.987 |
LHK_00711 | LHK_01127 | LHK_00711 | LHK_01127 | GGDEF domain protein. | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | 0.725 |
LHK_00711 | LHK_01129 | LHK_00711 | LHK_01129 | GGDEF domain protein. | GGDEF domain protein. | 0.779 |
LHK_00822 | LHK_00711 | LHK_00822 | LHK_00711 | Putative PAS/PAC sensor protein. | GGDEF domain protein. | 0.965 |
LHK_00822 | LHK_01015 | LHK_00822 | LHK_01015 | Putative PAS/PAC sensor protein. | Sensor protein. | 0.999 |
LHK_00822 | LHK_01126 | LHK_00822 | LHK_01126 | Putative PAS/PAC sensor protein. | EAL domain protein. | 0.750 |
LHK_00822 | LHK_01127 | LHK_00822 | LHK_01127 | Putative PAS/PAC sensor protein. | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | 0.609 |
LHK_00822 | LHK_01129 | LHK_00822 | LHK_01129 | Putative PAS/PAC sensor protein. | GGDEF domain protein. | 0.857 |
LHK_00822 | flhA | LHK_00822 | LHK_00784 | Putative PAS/PAC sensor protein. | FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.688 |
LHK_00822 | fliM | LHK_00822 | LHK_02354 | Putative PAS/PAC sensor protein. | FliM; Flagellar motor switch protein. | 0.967 |
LHK_00822 | ntrB | LHK_00822 | LHK_01905 | Putative PAS/PAC sensor protein. | NtrB; Sensor protein. | 0.499 |
LHK_01015 | LHK_00711 | LHK_01015 | LHK_00711 | Sensor protein. | GGDEF domain protein. | 0.955 |
LHK_01015 | LHK_00822 | LHK_01015 | LHK_00822 | Sensor protein. | Putative PAS/PAC sensor protein. | 0.999 |
LHK_01015 | LHK_01126 | LHK_01015 | LHK_01126 | Sensor protein. | EAL domain protein. | 0.836 |
LHK_01015 | LHK_01127 | LHK_01015 | LHK_01127 | Sensor protein. | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | 0.696 |
LHK_01015 | LHK_01129 | LHK_01015 | LHK_01129 | Sensor protein. | GGDEF domain protein. | 0.625 |
LHK_01015 | fleN | LHK_01015 | LHK_00782 | Sensor protein. | FleN; Flagellar synthesis regulator FleN. | 0.437 |
LHK_01015 | flhA | LHK_01015 | LHK_00784 | Sensor protein. | FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.711 |
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