STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHK_01307Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (303 aa)    
Predicted Functional Partners:
LHK_01228
Probable transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.733
LHK_00337
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.692
LHK_01368
Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.681
LHK_02286
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.625
ampR
AmpR; Belongs to the LysR transcriptional regulatory family.
  
     0.607
LHK_00467
Transcriptional regulatory protein LysR family.
  
     0.585
LHK_01308
Hypothetical protein.
       0.572
LHK_00650
Probable transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.568
LHK_01309
Isochorismatase hydrolase.
       0.544
LHK_02164
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.517
Your Current Organism:
Laribacter hongkongensis
NCBI taxonomy Id: 557598
Other names: L. hongkongensis HLHK9, Laribacter hongkongensis HLHK9, Laribacter hongkongensis str. HLHK9, Laribacter hongkongensis strain HLHK9
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