STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnKPhnK; Phosphonates transport ATP-binding protein phnK. (256 aa)    
Predicted Functional Partners:
phnJ
PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
 0.999
phnG
PhnG; Phosphonate metabolism protein PhnG.
 
 
 0.999
phnI
PhnI; Phosphonate metabolism protein PhnI.
 
 
 0.998
phnH
PhnH; Phosphonate metabolism protein PhnH.
 
 
 0.997
phnL
PhnL; Phosphonates transport ATP-binding protein phnL.
 
0.993
phnM
PhnM; Phosphonate metabolism protein PhnM.
 
  
 0.983
phnN
PhnN; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
 
  
 0.959
phnF
PhnF; Transcriptional regulator, GntR family.
 
  
 0.954
dppC
DppC; Dipeptide transport system permease protein.
 
     0.915
dppC2
DppC2; Binding-protein-dependent transport systems inner membrane component.
 
     0.909
Your Current Organism:
Laribacter hongkongensis
NCBI taxonomy Id: 557598
Other names: L. hongkongensis HLHK9, Laribacter hongkongensis HLHK9, Laribacter hongkongensis str. HLHK9, Laribacter hongkongensis strain HLHK9
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