STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHK_01634Probable bacteriophage tail fiber protein. (361 aa)    
Predicted Functional Partners:
LHK_01636
Probable bacteriophage regulatory protein; Gp21.
 
  
 0.980
LHK_01637
Putative inner membrane protein.
  
 
 0.924
LHK_01633
Phage tail protein I.
  
 
 0.923
LHK_01635
Putative phage baseplate protein.
  
   0.923
LHK_01638
Gp19.
  
 
 0.921
LHK_01645
Probable bacteriophage tail core protein; Gp14, phage major tail tube protein.
 
 
 0.921
LHK_01646
Probable bacteriophage tail sheath protein.
 
   0.918
LHK_01661
Phage terminase GpA.
 
  
 0.853
LHK_01639
Phage tail tape measure protein TP901, core region.
  
  
 0.805
LHK_01632
Gp52.
  
    0.803
Your Current Organism:
Laribacter hongkongensis
NCBI taxonomy Id: 557598
Other names: L. hongkongensis HLHK9, Laribacter hongkongensis HLHK9, Laribacter hongkongensis str. HLHK9, Laribacter hongkongensis strain HLHK9
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