Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
LHK_00404 | LHK_01645 | gpW/GP25 family protein. | Probable bacteriophage tail core protein; Gp14, phage major tail tube protein. | 0.889 |
LHK_00404 | LHK_01646 | gpW/GP25 family protein. | Probable bacteriophage tail sheath protein. | 0.921 |
LHK_00404 | LHK_01652 | gpW/GP25 family protein. | Hypothetical protein. | 0.748 |
LHK_00404 | LHK_01657 | gpW/GP25 family protein. | Phage baseplate-like protein. | 0.666 |
LHK_00404 | LHK_01661 | gpW/GP25 family protein. | Phage terminase GpA. | 0.661 |
LHK_01635 | LHK_01645 | Putative phage baseplate protein. | Probable bacteriophage tail core protein; Gp14, phage major tail tube protein. | 0.660 |
LHK_01635 | LHK_01646 | Putative phage baseplate protein. | Probable bacteriophage tail sheath protein. | 0.742 |
LHK_01635 | LHK_01652 | Putative phage baseplate protein. | Hypothetical protein. | 0.748 |
LHK_01635 | LHK_01657 | Putative phage baseplate protein. | Phage baseplate-like protein. | 0.666 |
LHK_01635 | LHK_01661 | Putative phage baseplate protein. | Phage terminase GpA. | 0.537 |
LHK_01645 | LHK_00404 | Probable bacteriophage tail core protein; Gp14, phage major tail tube protein. | gpW/GP25 family protein. | 0.889 |
LHK_01645 | LHK_01635 | Probable bacteriophage tail core protein; Gp14, phage major tail tube protein. | Putative phage baseplate protein. | 0.660 |
LHK_01645 | LHK_01646 | Probable bacteriophage tail core protein; Gp14, phage major tail tube protein. | Probable bacteriophage tail sheath protein. | 0.984 |
LHK_01645 | LHK_01652 | Probable bacteriophage tail core protein; Gp14, phage major tail tube protein. | Hypothetical protein. | 0.910 |
LHK_01645 | LHK_01657 | Probable bacteriophage tail core protein; Gp14, phage major tail tube protein. | Phage baseplate-like protein. | 0.659 |
LHK_01645 | LHK_01658 | Probable bacteriophage tail core protein; Gp14, phage major tail tube protein. | Phage portal protein, lambda family. | 0.766 |
LHK_01645 | LHK_01661 | Probable bacteriophage tail core protein; Gp14, phage major tail tube protein. | Phage terminase GpA. | 0.903 |
LHK_01645 | LHK_02596 | Probable bacteriophage tail core protein; Gp14, phage major tail tube protein. | gpW/GP25 family protein. | 0.889 |
LHK_01646 | LHK_00404 | Probable bacteriophage tail sheath protein. | gpW/GP25 family protein. | 0.921 |
LHK_01646 | LHK_01635 | Probable bacteriophage tail sheath protein. | Putative phage baseplate protein. | 0.742 |
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