Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHK_00046 | LHK_00938 | LHK_00046 | LHK_00938 | Probable glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Probable peroxidase. | 0.531 |
LHK_00046 | LHK_01491 | LHK_00046 | LHK_01491 | Probable glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Probable peroxiredoxin/glutaredoxin family protein. | 0.633 |
LHK_00046 | gltB | LHK_00046 | LHK_00718 | Probable glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | GltB; Glutamate synthase, large subunit. | 0.530 |
LHK_00046 | lpdA1 | LHK_00046 | LHK_00131 | Probable glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | LpdA1; Dihydrolipoamide dehydrogenase. | 0.586 |
LHK_00046 | trxA | LHK_00046 | LHK_01690 | Probable glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | TrxA; Thioredoxin; Belongs to the thioredoxin family. | 0.679 |
LHK_00046 | trxB | LHK_00046 | LHK_01482 | Probable glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | TrxB; Thioredoxin reductase. | 0.422 |
LHK_00938 | LHK_00046 | LHK_00938 | LHK_00046 | Probable peroxidase. | Probable glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.531 |
LHK_00938 | LHK_01491 | LHK_00938 | LHK_01491 | Probable peroxidase. | Probable peroxiredoxin/glutaredoxin family protein. | 0.975 |
LHK_00938 | gltB | LHK_00938 | LHK_00718 | Probable peroxidase. | GltB; Glutamate synthase, large subunit. | 0.531 |
LHK_00938 | lpdA1 | LHK_00938 | LHK_00131 | Probable peroxidase. | LpdA1; Dihydrolipoamide dehydrogenase. | 0.592 |
LHK_00938 | trxA | LHK_00938 | LHK_01690 | Probable peroxidase. | TrxA; Thioredoxin; Belongs to the thioredoxin family. | 0.659 |
LHK_00938 | trxB | LHK_00938 | LHK_01482 | Probable peroxidase. | TrxB; Thioredoxin reductase. | 0.951 |
LHK_01491 | LHK_00046 | LHK_01491 | LHK_00046 | Probable peroxiredoxin/glutaredoxin family protein. | Probable glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.633 |
LHK_01491 | LHK_00938 | LHK_01491 | LHK_00938 | Probable peroxiredoxin/glutaredoxin family protein. | Probable peroxidase. | 0.975 |
LHK_01491 | lpdA1 | LHK_01491 | LHK_00131 | Probable peroxiredoxin/glutaredoxin family protein. | LpdA1; Dihydrolipoamide dehydrogenase. | 0.576 |
LHK_01491 | trxA | LHK_01491 | LHK_01690 | Probable peroxiredoxin/glutaredoxin family protein. | TrxA; Thioredoxin; Belongs to the thioredoxin family. | 0.790 |
LHK_01491 | trxB | LHK_01491 | LHK_01482 | Probable peroxiredoxin/glutaredoxin family protein. | TrxB; Thioredoxin reductase. | 0.570 |
LHK_02366 | trxA | LHK_02366 | LHK_01690 | Low molecular weight phosphotyrosine protein phosphatase. | TrxA; Thioredoxin; Belongs to the thioredoxin family. | 0.742 |
cysH | gltB | LHK_00609 | LHK_00718 | CysH; Reduction of activated sulfate into sulfite. | GltB; Glutamate synthase, large subunit. | 0.454 |
cysH | lpdA1 | LHK_00609 | LHK_00131 | CysH; Reduction of activated sulfate into sulfite. | LpdA1; Dihydrolipoamide dehydrogenase. | 0.402 |
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