Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHK_00377 | LHK_00408 | LHK_00377 | LHK_00408 | Putative phage replication protein. | Tail completion protein-like protein similar to Rs03499. | 0.585 |
LHK_00377 | LHK_00417 | LHK_00377 | LHK_00417 | Putative phage replication protein. | Phage major capsid protein, P2 family similar to Xoo1607. | 0.845 |
LHK_00377 | LHK_00420 | LHK_00377 | LHK_00420 | Putative phage replication protein. | Bacteriophage gpQ. | 0.776 |
LHK_00377 | LHK_01726 | LHK_00377 | LHK_01726 | Putative phage replication protein. | Transposon Tn2501 resolvase. | 0.583 |
LHK_00377 | LHK_02584 | LHK_00377 | LHK_02584 | Putative phage replication protein. | Phage major capsid protein, P2 family similar to Xoo1607. | 0.845 |
LHK_00377 | LHK_02593 | LHK_00377 | LHK_02593 | Putative phage replication protein. | Tail completion protein-like protein similar to Rs03499. | 0.585 |
LHK_00377 | gpl-1 | LHK_00377 | LHK_00415 | Putative phage replication protein. | Gpl; Head completion protein. | 0.737 |
LHK_00377 | gpl-2 | LHK_00377 | LHK_02586 | Putative phage replication protein. | Gpl; Head completion protein. | 0.737 |
LHK_00408 | LHK_00377 | LHK_00408 | LHK_00377 | Tail completion protein-like protein similar to Rs03499. | Putative phage replication protein. | 0.585 |
LHK_00408 | LHK_00417 | LHK_00408 | LHK_00417 | Tail completion protein-like protein similar to Rs03499. | Phage major capsid protein, P2 family similar to Xoo1607. | 0.750 |
LHK_00408 | LHK_00420 | LHK_00408 | LHK_00420 | Tail completion protein-like protein similar to Rs03499. | Bacteriophage gpQ. | 0.721 |
LHK_00408 | LHK_00907 | LHK_00408 | LHK_00907 | Tail completion protein-like protein similar to Rs03499. | Putative phage replication protein. | 0.585 |
LHK_00408 | LHK_01726 | LHK_00408 | LHK_01726 | Tail completion protein-like protein similar to Rs03499. | Transposon Tn2501 resolvase. | 0.594 |
LHK_00408 | LHK_02584 | LHK_00408 | LHK_02584 | Tail completion protein-like protein similar to Rs03499. | Phage major capsid protein, P2 family similar to Xoo1607. | 0.642 |
LHK_00408 | LHK_02622 | LHK_00408 | LHK_02622 | Tail completion protein-like protein similar to Rs03499. | Putative phage replication protein A. | 0.585 |
LHK_00408 | gpl-1 | LHK_00408 | LHK_00415 | Tail completion protein-like protein similar to Rs03499. | Gpl; Head completion protein. | 0.792 |
LHK_00408 | gpl-2 | LHK_00408 | LHK_02586 | Tail completion protein-like protein similar to Rs03499. | Gpl; Head completion protein. | 0.642 |
LHK_00417 | LHK_00377 | LHK_00417 | LHK_00377 | Phage major capsid protein, P2 family similar to Xoo1607. | Putative phage replication protein. | 0.845 |
LHK_00417 | LHK_00408 | LHK_00417 | LHK_00408 | Phage major capsid protein, P2 family similar to Xoo1607. | Tail completion protein-like protein similar to Rs03499. | 0.750 |
LHK_00417 | LHK_00420 | LHK_00417 | LHK_00420 | Phage major capsid protein, P2 family similar to Xoo1607. | Bacteriophage gpQ. | 0.960 |
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