Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHK_00736 | LHK_01814 | LHK_00736 | LHK_01814 | LrgA family protein. | LrgB family protein. | 0.801 |
LHK_01814 | LHK_00736 | LHK_01814 | LHK_00736 | LrgB family protein. | LrgA family protein. | 0.801 |
LHK_01814 | LHK_01816 | LHK_01814 | LHK_01816 | LrgB family protein. | Putative lipoprotein. | 0.514 |
LHK_01814 | LHK_01817 | LHK_01814 | LHK_01817 | LrgB family protein. | sec-C motif domain protein; K09858 SEC-C motif domain protein; Belongs to the UPF0225 family. | 0.514 |
LHK_01814 | lrgA | LHK_01814 | LHK_01815 | LrgB family protein. | LrgA; Putative effector of murein hydrolase LrgA. | 0.983 |
LHK_01816 | LHK_01814 | LHK_01816 | LHK_01814 | Putative lipoprotein. | LrgB family protein. | 0.514 |
LHK_01816 | LHK_01817 | LHK_01816 | LHK_01817 | Putative lipoprotein. | sec-C motif domain protein; K09858 SEC-C motif domain protein; Belongs to the UPF0225 family. | 0.773 |
LHK_01816 | lrgA | LHK_01816 | LHK_01815 | Putative lipoprotein. | LrgA; Putative effector of murein hydrolase LrgA. | 0.514 |
LHK_01817 | LHK_01814 | LHK_01817 | LHK_01814 | sec-C motif domain protein; K09858 SEC-C motif domain protein; Belongs to the UPF0225 family. | LrgB family protein. | 0.514 |
LHK_01817 | LHK_01816 | LHK_01817 | LHK_01816 | sec-C motif domain protein; K09858 SEC-C motif domain protein; Belongs to the UPF0225 family. | Putative lipoprotein. | 0.773 |
LHK_01817 | lrgA | LHK_01817 | LHK_01815 | sec-C motif domain protein; K09858 SEC-C motif domain protein; Belongs to the UPF0225 family. | LrgA; Putative effector of murein hydrolase LrgA. | 0.514 |
lrgA | LHK_01814 | LHK_01815 | LHK_01814 | LrgA; Putative effector of murein hydrolase LrgA. | LrgB family protein. | 0.983 |
lrgA | LHK_01816 | LHK_01815 | LHK_01816 | LrgA; Putative effector of murein hydrolase LrgA. | Putative lipoprotein. | 0.514 |
lrgA | LHK_01817 | LHK_01815 | LHK_01817 | LrgA; Putative effector of murein hydrolase LrgA. | sec-C motif domain protein; K09858 SEC-C motif domain protein; Belongs to the UPF0225 family. | 0.514 |