Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHK_01486 | LHK_01944 | LHK_01486 | LHK_01944 | Probable NADH-ubiquinone oxidoreductase. | NADH-dependent butanol dehydrogenase B. | 0.410 |
LHK_01486 | guaA | LHK_01486 | LHK_00777 | Probable NADH-ubiquinone oxidoreductase. | GuaA; Catalyzes the synthesis of GMP from XMP. | 0.454 |
LHK_01486 | yqhD | LHK_01486 | LHK_02668 | Probable NADH-ubiquinone oxidoreductase. | YqhD; Putative alcohol dehydrogenase. | 0.410 |
LHK_01935 | LHK_01944 | LHK_01935 | LHK_01944 | Hypothetical protein. | NADH-dependent butanol dehydrogenase B. | 0.402 |
LHK_01935 | yqhD | LHK_01935 | LHK_02668 | Hypothetical protein. | YqhD; Putative alcohol dehydrogenase. | 0.402 |
LHK_01944 | LHK_01486 | LHK_01944 | LHK_01486 | NADH-dependent butanol dehydrogenase B. | Probable NADH-ubiquinone oxidoreductase. | 0.410 |
LHK_01944 | LHK_01935 | LHK_01944 | LHK_01935 | NADH-dependent butanol dehydrogenase B. | Hypothetical protein. | 0.402 |
LHK_01944 | LHK_01945 | LHK_01944 | LHK_01945 | NADH-dependent butanol dehydrogenase B. | Hypothetical protein. | 0.473 |
LHK_01944 | LHK_02171 | LHK_01944 | LHK_02171 | NADH-dependent butanol dehydrogenase B. | Transcriptional regulator, AraC family protein. | 0.402 |
LHK_01944 | LHK_02213 | LHK_01944 | LHK_02213 | NADH-dependent butanol dehydrogenase B. | Probable aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.426 |
LHK_01944 | arcA-1 | LHK_01944 | LHK_02729 | NADH-dependent butanol dehydrogenase B. | ArcA; Arginine deiminase. | 0.420 |
LHK_01944 | arcA-2 | LHK_01944 | LHK_02734 | NADH-dependent butanol dehydrogenase B. | ArcA; Arginine deiminase. | 0.420 |
LHK_01944 | darR | LHK_01944 | LHK_01725 | NADH-dependent butanol dehydrogenase B. | darR; probable AraC family transcriptional regulator. | 0.402 |
LHK_01944 | guaA | LHK_01944 | LHK_00777 | NADH-dependent butanol dehydrogenase B. | GuaA; Catalyzes the synthesis of GMP from XMP. | 0.838 |
LHK_01944 | yqhD | LHK_01944 | LHK_02668 | NADH-dependent butanol dehydrogenase B. | YqhD; Putative alcohol dehydrogenase. | 0.907 |
LHK_01945 | LHK_01944 | LHK_01945 | LHK_01944 | Hypothetical protein. | NADH-dependent butanol dehydrogenase B. | 0.473 |
LHK_02171 | LHK_01944 | LHK_02171 | LHK_01944 | Transcriptional regulator, AraC family protein. | NADH-dependent butanol dehydrogenase B. | 0.402 |
LHK_02171 | yqhD | LHK_02171 | LHK_02668 | Transcriptional regulator, AraC family protein. | YqhD; Putative alcohol dehydrogenase. | 0.402 |
LHK_02213 | LHK_01944 | LHK_02213 | LHK_01944 | Probable aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | NADH-dependent butanol dehydrogenase B. | 0.426 |
LHK_02213 | guaA | LHK_02213 | LHK_00777 | Probable aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | GuaA; Catalyzes the synthesis of GMP from XMP. | 0.415 |
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