Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHK_02016 | LHK_02019 | LHK_02016 | LHK_02019 | Hypothetical protein. | Sugar isomerase, KpsF/GutQ family. | 0.457 |
LHK_02016 | LHK_02020 | LHK_02016 | LHK_02020 | Hypothetical protein. | Sugar phosphate isomerase (Involved in capsule formation) protein. | 0.457 |
LHK_02016 | LHK_02021 | LHK_02016 | LHK_02021 | Hypothetical protein. | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. | 0.457 |
LHK_02016 | LHK_02022 | LHK_02016 | LHK_02022 | Hypothetical protein. | DUF1239 domain containing protein. | 0.457 |
LHK_02016 | kefB | LHK_02016 | LHK_02018 | Hypothetical protein. | KefB; Glutathione-regulated potassium-efflux system protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.636 |
LHK_02016 | pdxH | LHK_02016 | LHK_02017 | Hypothetical protein. | PdxH; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.636 |
LHK_02019 | LHK_02016 | LHK_02019 | LHK_02016 | Sugar isomerase, KpsF/GutQ family. | Hypothetical protein. | 0.457 |
LHK_02019 | LHK_02020 | LHK_02019 | LHK_02020 | Sugar isomerase, KpsF/GutQ family. | Sugar phosphate isomerase (Involved in capsule formation) protein. | 0.994 |
LHK_02019 | LHK_02021 | LHK_02019 | LHK_02021 | Sugar isomerase, KpsF/GutQ family. | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. | 0.992 |
LHK_02019 | LHK_02022 | LHK_02019 | LHK_02022 | Sugar isomerase, KpsF/GutQ family. | DUF1239 domain containing protein. | 0.813 |
LHK_02019 | kefB | LHK_02019 | LHK_02018 | Sugar isomerase, KpsF/GutQ family. | KefB; Glutathione-regulated potassium-efflux system protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.629 |
LHK_02019 | nnrD | LHK_02019 | LHK_02033 | Sugar isomerase, KpsF/GutQ family. | Predicted sugar kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both e [...] | 0.484 |
LHK_02019 | pdxH | LHK_02019 | LHK_02017 | Sugar isomerase, KpsF/GutQ family. | PdxH; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.546 |
LHK_02020 | LHK_02016 | LHK_02020 | LHK_02016 | Sugar phosphate isomerase (Involved in capsule formation) protein. | Hypothetical protein. | 0.457 |
LHK_02020 | LHK_02019 | LHK_02020 | LHK_02019 | Sugar phosphate isomerase (Involved in capsule formation) protein. | Sugar isomerase, KpsF/GutQ family. | 0.994 |
LHK_02020 | LHK_02021 | LHK_02020 | LHK_02021 | Sugar phosphate isomerase (Involved in capsule formation) protein. | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. | 0.918 |
LHK_02020 | LHK_02022 | LHK_02020 | LHK_02022 | Sugar phosphate isomerase (Involved in capsule formation) protein. | DUF1239 domain containing protein. | 0.813 |
LHK_02020 | kefB | LHK_02020 | LHK_02018 | Sugar phosphate isomerase (Involved in capsule formation) protein. | KefB; Glutathione-regulated potassium-efflux system protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.629 |
LHK_02020 | nnrD | LHK_02020 | LHK_02033 | Sugar phosphate isomerase (Involved in capsule formation) protein. | Predicted sugar kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both e [...] | 0.484 |
LHK_02020 | pdxH | LHK_02020 | LHK_02017 | Sugar phosphate isomerase (Involved in capsule formation) protein. | PdxH; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.546 |
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