STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fixSFixS; Nitrogen fixation protein. (65 aa)    
Predicted Functional Partners:
LHK_00996
Probable cytochrome-c oxidase, subunit II.
 
  
 0.746
lgt
Lgt; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.737
LHK_00998
Probable cytochrome-c oxidase, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.729
LHK_00995
Probable cytochrome-c oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.708
LHK_02096
4Fe-4S ferredoxin, iron-sulfur binding.
 
  
 0.696
LHK_00999
Probable iron-sulfur 4Fe-4S ferredoxin transmembrane protein.
 
  
 0.690
LHK_00799
Hypothetical protein.
 
     0.602
LHK_01000
FixH domain containing protein.
 
     0.591
LHK_01379
Probable cation transport P-type ATPase.
 
  
 0.582
ilvD
IlvD; Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.533
Your Current Organism:
Laribacter hongkongensis
NCBI taxonomy Id: 557598
Other names: L. hongkongensis HLHK9, Laribacter hongkongensis HLHK9, Laribacter hongkongensis str. HLHK9, Laribacter hongkongensis strain HLHK9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.