STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHK_02301Probable glucose-methanol-choline oxidoreductase. (531 aa)    
Predicted Functional Partners:
LHK_02302
Hypothetical protein.
 
     0.954
LHK_02883
Hypothetical protein.
    
 0.947
LHK_02303
Probable aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.870
coxB
CoxB; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.820
LHK_01056
Hypothetical protein.
    
 0.803
LHK_01420
Hypothetical protein.
    
 0.803
LHK_01955
Putative inner membrane protein.
    
 0.803
LHK_00203
Cytochrome c family protein.
   
 
 0.777
LHK_00998
Probable cytochrome-c oxidase, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.777
LHK_03087
Cytochrome c'' precursor.
  
 
 0.747
Your Current Organism:
Laribacter hongkongensis
NCBI taxonomy Id: 557598
Other names: L. hongkongensis HLHK9, Laribacter hongkongensis HLHK9, Laribacter hongkongensis str. HLHK9, Laribacter hongkongensis strain HLHK9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.