Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHK_00554 | LHK_02433 | LHK_00554 | LHK_02433 | Probable chemotaxis protein CheA. | Probable chemotaxis protein CheA. | 0.900 |
LHK_00554 | LHK_02687 | LHK_00554 | LHK_02687 | Probable chemotaxis protein CheA. | Probable methyl-accepting chemotaxis protein. | 0.880 |
LHK_00554 | LHK_02688 | LHK_00554 | LHK_02688 | Probable chemotaxis protein CheA. | Probable methyl-accepting chemotaxis protein. | 0.555 |
LHK_00554 | LHK_02814 | LHK_00554 | LHK_02814 | Probable chemotaxis protein CheA. | Methyl-accepting chemotaxis sensory transducer. | 0.556 |
LHK_00554 | cheA | LHK_00554 | LHK_00562 | Probable chemotaxis protein CheA. | CheA; Chemotaxis protein CheA. | 0.933 |
LHK_00554 | cheV1-1 | LHK_00554 | LHK_00557 | Probable chemotaxis protein CheA. | CheV1; Chemotaxis protein CheV. | 0.999 |
LHK_00554 | cheV1-2 | LHK_00554 | LHK_01360 | Probable chemotaxis protein CheA. | CheV1; Chemotaxis protein CheV. | 0.999 |
LHK_00554 | cheV1-3 | LHK_00554 | LHK_02430 | Probable chemotaxis protein CheA. | CheV1; Chemotaxis protein CheV. | 0.999 |
LHK_02433 | LHK_00554 | LHK_02433 | LHK_00554 | Probable chemotaxis protein CheA. | Probable chemotaxis protein CheA. | 0.900 |
LHK_02433 | LHK_02687 | LHK_02433 | LHK_02687 | Probable chemotaxis protein CheA. | Probable methyl-accepting chemotaxis protein. | 0.880 |
LHK_02433 | LHK_02688 | LHK_02433 | LHK_02688 | Probable chemotaxis protein CheA. | Probable methyl-accepting chemotaxis protein. | 0.551 |
LHK_02433 | LHK_02814 | LHK_02433 | LHK_02814 | Probable chemotaxis protein CheA. | Methyl-accepting chemotaxis sensory transducer. | 0.556 |
LHK_02433 | cheA | LHK_02433 | LHK_00562 | Probable chemotaxis protein CheA. | CheA; Chemotaxis protein CheA. | 0.919 |
LHK_02433 | cheV1-1 | LHK_02433 | LHK_00557 | Probable chemotaxis protein CheA. | CheV1; Chemotaxis protein CheV. | 0.999 |
LHK_02433 | cheV1-2 | LHK_02433 | LHK_01360 | Probable chemotaxis protein CheA. | CheV1; Chemotaxis protein CheV. | 0.999 |
LHK_02433 | cheV1-3 | LHK_02433 | LHK_02430 | Probable chemotaxis protein CheA. | CheV1; Chemotaxis protein CheV. | 0.999 |
LHK_02687 | LHK_00554 | LHK_02687 | LHK_00554 | Probable methyl-accepting chemotaxis protein. | Probable chemotaxis protein CheA. | 0.880 |
LHK_02687 | LHK_02433 | LHK_02687 | LHK_02433 | Probable methyl-accepting chemotaxis protein. | Probable chemotaxis protein CheA. | 0.880 |
LHK_02687 | LHK_02688 | LHK_02687 | LHK_02688 | Probable methyl-accepting chemotaxis protein. | Probable methyl-accepting chemotaxis protein. | 0.947 |
LHK_02687 | LHK_02814 | LHK_02687 | LHK_02814 | Probable methyl-accepting chemotaxis protein. | Methyl-accepting chemotaxis sensory transducer. | 0.844 |
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