Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHK_00749 | LHK_02767 | LHK_00749 | LHK_02767 | Probable histidinol-phosphatase. | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.910 |
LHK_00823 | LHK_00834 | LHK_00823 | LHK_00834 | Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | Chain length determinant protein. | 0.752 |
LHK_00823 | LHK_01015 | LHK_00823 | LHK_01015 | Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | Sensor protein. | 0.525 |
LHK_00823 | LHK_02767 | LHK_00823 | LHK_02767 | Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.639 |
LHK_00823 | LHK_02997 | LHK_00823 | LHK_02997 | Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | DTDPglucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.544 |
LHK_00823 | galU | LHK_00823 | LHK_02876 | Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | GalU; UTP-glucose-1-phosphate uridylyltransferase. | 0.531 |
LHK_00823 | ribB | LHK_00823 | LHK_02390 | Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | ribAB; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.449 |
LHK_00834 | LHK_00823 | LHK_00834 | LHK_00823 | Chain length determinant protein. | Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.752 |
LHK_00834 | LHK_01015 | LHK_00834 | LHK_01015 | Chain length determinant protein. | Sensor protein. | 0.528 |
LHK_00834 | LHK_02767 | LHK_00834 | LHK_02767 | Chain length determinant protein. | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.580 |
LHK_00834 | flaG | LHK_00834 | LHK_02704 | Chain length determinant protein. | FlaG; Uncharacterized flagellar protein FlaG. | 0.452 |
LHK_00834 | galU | LHK_00834 | LHK_02876 | Chain length determinant protein. | GalU; UTP-glucose-1-phosphate uridylyltransferase. | 0.534 |
LHK_01015 | LHK_00823 | LHK_01015 | LHK_00823 | Sensor protein. | Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.525 |
LHK_01015 | LHK_00834 | LHK_01015 | LHK_00834 | Sensor protein. | Chain length determinant protein. | 0.528 |
LHK_01015 | LHK_02767 | LHK_01015 | LHK_02767 | Sensor protein. | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.538 |
LHK_01015 | flaG | LHK_01015 | LHK_02704 | Sensor protein. | FlaG; Uncharacterized flagellar protein FlaG. | 0.457 |
LHK_01015 | galU | LHK_01015 | LHK_02876 | Sensor protein. | GalU; UTP-glucose-1-phosphate uridylyltransferase. | 0.476 |
LHK_01015 | ribB | LHK_01015 | LHK_02390 | Sensor protein. | ribAB; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.580 |
LHK_01968 | LHK_01970 | LHK_01968 | LHK_01970 | Cyanophycin synthetase. | ATP-grasp enzyme-like D-alanine-D-alanine ligase; Belongs to the MurCDEF family. | 0.937 |
LHK_01968 | LHK_02767 | LHK_01968 | LHK_02767 | Cyanophycin synthetase. | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.517 |
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