STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHK_02794Lipolytic enzyme, G-D-S-L. (232 aa)    
Predicted Functional Partners:
LHK_02795
WbcV protein.
  
    0.751
LHK_02796
Hypothetical protein.
       0.746
LHK_02797
ABC transporter related.
       0.724
LHK_02798
ABC polysaccharide/polyol phosphate export systems, inner membrane subunit.
       0.724
LHK_02990
Hypothetical protein.
  
 
 0.721
LHK_02792
WbmJ.
 
     0.602
LHK_02791
Asparagine synthase, glutamine-hydrolyzing.
 
     0.579
LHK_02793
Hypothetical protein.
       0.550
LHK_02790
Putative glutamine amidotransferase.
 
     0.534
LHK_01771
Hypothetical protein.
  
 
 0.482
Your Current Organism:
Laribacter hongkongensis
NCBI taxonomy Id: 557598
Other names: L. hongkongensis HLHK9, Laribacter hongkongensis HLHK9, Laribacter hongkongensis str. HLHK9, Laribacter hongkongensis strain HLHK9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.