STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHK_02835Probable nitrite extrusion protein. (382 aa)    
Predicted Functional Partners:
LHK_02685
Oxidoreductase, 2-nitropropane dioxygenase family.
  
 
 0.908
napA
NapA; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
  
 
 0.906
LHK_02084
Nitrate reductase; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
   
 
  0.900
narX
NarX; Transmembrane nitrate/nitrite sensor kinase transcription regulator protein.
 
  
 0.721
LHK_00305
Peptidase U32.
  
    0.554
LHK_01478
Tetrathionate reductase, subunit B.
 
   
 0.553
LHK_03088
Nitric oxide reductase.
  
  
 0.544
LHK_00304
Sterol-binding domain protein.
 
    0.515
LHK_01772
Putative phage capsid protein.
   
    0.511
LHK_00306
Probable protease.
  
    0.496
Your Current Organism:
Laribacter hongkongensis
NCBI taxonomy Id: 557598
Other names: L. hongkongensis HLHK9, Laribacter hongkongensis HLHK9, Laribacter hongkongensis str. HLHK9, Laribacter hongkongensis strain HLHK9
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