STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHK_02897Putative aliphatic sulfonates binding protein; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. (327 aa)    
Predicted Functional Partners:
LHK_02896
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
       0.774
LHK_01183
Binding-protein-dependent transport systems inner membrane component.
 
  
 0.762
LHK_01184
ABC transporter related.
  
  
 0.691
LHK_00447
Probable nitrate ABC transporter ATP-binding protein.
  
  
 0.629
hemB
HemB; Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
       0.555
glmM
GlmM; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
       0.505
LHK_00917
Auxiliary mobilization protein C.
  
  
 0.487
gltB
GltB; Glutamate synthase, large subunit.
   
  
 0.452
folP
FolP; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
     
 0.432
Your Current Organism:
Laribacter hongkongensis
NCBI taxonomy Id: 557598
Other names: L. hongkongensis HLHK9, Laribacter hongkongensis HLHK9, Laribacter hongkongensis str. HLHK9, Laribacter hongkongensis strain HLHK9
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