Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHK_01059 | msbA | LHK_01059 | LHK_02949 | Probable ABC transport system ATP-binding protein. | MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.908 |
LHK_01967 | LHK_02238 | LHK_01967 | LHK_02238 | ABC transporter related. | Putative ABC-2 type transport system permease protein. | 0.689 |
LHK_01967 | LHK_02240 | LHK_01967 | LHK_02240 | ABC transporter related. | Type I antifreeze protein:HlyD family secretion protein. | 0.684 |
LHK_01967 | LHK_02241 | LHK_01967 | LHK_02241 | ABC transporter related. | Putative outer membrane transport protein involved in copper (Silver) tolerance. | 0.680 |
LHK_01967 | lpxK | LHK_01967 | LHK_01102 | ABC transporter related. | LpxK; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.515 |
LHK_01967 | msbA | LHK_01967 | LHK_02949 | ABC transporter related. | MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.617 |
LHK_02238 | LHK_01967 | LHK_02238 | LHK_01967 | Putative ABC-2 type transport system permease protein. | ABC transporter related. | 0.689 |
LHK_02238 | LHK_02240 | LHK_02238 | LHK_02240 | Putative ABC-2 type transport system permease protein. | Type I antifreeze protein:HlyD family secretion protein. | 0.988 |
LHK_02238 | LHK_02241 | LHK_02238 | LHK_02241 | Putative ABC-2 type transport system permease protein. | Putative outer membrane transport protein involved in copper (Silver) tolerance. | 0.926 |
LHK_02238 | msbA | LHK_02238 | LHK_02949 | Putative ABC-2 type transport system permease protein. | MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.808 |
LHK_02240 | LHK_01967 | LHK_02240 | LHK_01967 | Type I antifreeze protein:HlyD family secretion protein. | ABC transporter related. | 0.684 |
LHK_02240 | LHK_02238 | LHK_02240 | LHK_02238 | Type I antifreeze protein:HlyD family secretion protein. | Putative ABC-2 type transport system permease protein. | 0.988 |
LHK_02240 | LHK_02241 | LHK_02240 | LHK_02241 | Type I antifreeze protein:HlyD family secretion protein. | Putative outer membrane transport protein involved in copper (Silver) tolerance. | 0.978 |
LHK_02240 | msbA | LHK_02240 | LHK_02949 | Type I antifreeze protein:HlyD family secretion protein. | MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.697 |
LHK_02241 | LHK_01967 | LHK_02241 | LHK_01967 | Putative outer membrane transport protein involved in copper (Silver) tolerance. | ABC transporter related. | 0.680 |
LHK_02241 | LHK_02238 | LHK_02241 | LHK_02238 | Putative outer membrane transport protein involved in copper (Silver) tolerance. | Putative ABC-2 type transport system permease protein. | 0.926 |
LHK_02241 | LHK_02240 | LHK_02241 | LHK_02240 | Putative outer membrane transport protein involved in copper (Silver) tolerance. | Type I antifreeze protein:HlyD family secretion protein. | 0.978 |
LHK_02241 | msbA | LHK_02241 | LHK_02949 | Putative outer membrane transport protein involved in copper (Silver) tolerance. | MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.684 |
LHK_02950 | lpxK | LHK_02950 | LHK_01102 | Probable glycosyltrnasferase. | LpxK; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.680 |
LHK_02950 | msbA | LHK_02950 | LHK_02949 | Probable glycosyltrnasferase. | MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.787 |
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