Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHK_00985 | LHK_01392 | LHK_00985 | LHK_01392 | TRAP dicarboxylate transporter, DctM subunit. | TRAP dicarboxylate transporter, DctM subunit precursor. | 0.915 |
LHK_00985 | LHK_02987 | LHK_00985 | LHK_02987 | TRAP dicarboxylate transporter, DctM subunit. | TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | 0.516 |
LHK_01392 | LHK_00985 | LHK_01392 | LHK_00985 | TRAP dicarboxylate transporter, DctM subunit precursor. | TRAP dicarboxylate transporter, DctM subunit. | 0.915 |
LHK_01392 | LHK_02987 | LHK_01392 | LHK_02987 | TRAP dicarboxylate transporter, DctM subunit precursor. | TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | 0.414 |
LHK_02987 | LHK_00985 | LHK_02987 | LHK_00985 | TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | TRAP dicarboxylate transporter, DctM subunit. | 0.516 |
LHK_02987 | LHK_01392 | LHK_02987 | LHK_01392 | TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | TRAP dicarboxylate transporter, DctM subunit precursor. | 0.414 |
LHK_02987 | LHK_02988 | LHK_02987 | LHK_02988 | TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | TRAP-type mannitol/chloroaromatic compound transport system, small permease component. | 0.901 |
LHK_02987 | LHK_02989 | LHK_02987 | LHK_02989 | TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | TRAP-type mannitol/chloroaromatic compound transport system, large permease component. | 0.908 |
LHK_02987 | thrB | LHK_02987 | LHK_02986 | TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | Ketohexokinase; Belongs to the pseudomonas-type ThrB family. | 0.405 |
LHK_02988 | LHK_02987 | LHK_02988 | LHK_02987 | TRAP-type mannitol/chloroaromatic compound transport system, small permease component. | TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | 0.901 |
LHK_02988 | LHK_02989 | LHK_02988 | LHK_02989 | TRAP-type mannitol/chloroaromatic compound transport system, small permease component. | TRAP-type mannitol/chloroaromatic compound transport system, large permease component. | 0.973 |
LHK_02989 | LHK_02987 | LHK_02989 | LHK_02987 | TRAP-type mannitol/chloroaromatic compound transport system, large permease component. | TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | 0.908 |
LHK_02989 | LHK_02988 | LHK_02989 | LHK_02988 | TRAP-type mannitol/chloroaromatic compound transport system, large permease component. | TRAP-type mannitol/chloroaromatic compound transport system, small permease component. | 0.973 |
thrB | LHK_02987 | LHK_02986 | LHK_02987 | Ketohexokinase; Belongs to the pseudomonas-type ThrB family. | TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | 0.405 |