Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHK_03037 | LHK_03038 | LHK_03037 | LHK_03038 | Hypothetical protein. | Hypothetical protein. | 0.507 |
LHK_03037 | LHK_03040 | LHK_03037 | LHK_03040 | Hypothetical protein. | Hypothetical protein. | 0.507 |
LHK_03037 | bioA | LHK_03037 | LHK_03039 | Hypothetical protein. | BioA; Adenosylmethionine-8-amino-7-oxononanoate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.741 |
LHK_03037 | pdxA | LHK_03037 | LHK_03036 | Hypothetical protein. | PdxA; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | 0.773 |
LHK_03038 | LHK_03037 | LHK_03038 | LHK_03037 | Hypothetical protein. | Hypothetical protein. | 0.507 |
LHK_03038 | LHK_03040 | LHK_03038 | LHK_03040 | Hypothetical protein. | Hypothetical protein. | 0.773 |
LHK_03038 | bioA | LHK_03038 | LHK_03039 | Hypothetical protein. | BioA; Adenosylmethionine-8-amino-7-oxononanoate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.526 |
LHK_03038 | pdxA | LHK_03038 | LHK_03036 | Hypothetical protein. | PdxA; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | 0.507 |
LHK_03040 | LHK_03037 | LHK_03040 | LHK_03037 | Hypothetical protein. | Hypothetical protein. | 0.507 |
LHK_03040 | LHK_03038 | LHK_03040 | LHK_03038 | Hypothetical protein. | Hypothetical protein. | 0.773 |
LHK_03040 | bioA | LHK_03040 | LHK_03039 | Hypothetical protein. | BioA; Adenosylmethionine-8-amino-7-oxononanoate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.526 |
LHK_03040 | pdxA | LHK_03040 | LHK_03036 | Hypothetical protein. | PdxA; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | 0.507 |
bioA | LHK_03037 | LHK_03039 | LHK_03037 | BioA; Adenosylmethionine-8-amino-7-oxononanoate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Hypothetical protein. | 0.741 |
bioA | LHK_03038 | LHK_03039 | LHK_03038 | BioA; Adenosylmethionine-8-amino-7-oxononanoate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Hypothetical protein. | 0.526 |
bioA | LHK_03040 | LHK_03039 | LHK_03040 | BioA; Adenosylmethionine-8-amino-7-oxononanoate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Hypothetical protein. | 0.526 |
bioA | pdxA | LHK_03039 | LHK_03036 | BioA; Adenosylmethionine-8-amino-7-oxononanoate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | PdxA; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | 0.768 |
pdxA | LHK_03037 | LHK_03036 | LHK_03037 | PdxA; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | Hypothetical protein. | 0.773 |
pdxA | LHK_03038 | LHK_03036 | LHK_03038 | PdxA; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | Hypothetical protein. | 0.507 |
pdxA | LHK_03040 | LHK_03036 | LHK_03040 | PdxA; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | Hypothetical protein. | 0.507 |
pdxA | bioA | LHK_03036 | LHK_03039 | PdxA; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | BioA; Adenosylmethionine-8-amino-7-oxononanoate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.768 |