Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHK_00129 | LHK_00673 | LHK_00129 | LHK_00673 | Sensory box/GGDEF family protein. | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | 0.892 |
LHK_00129 | LHK_00711 | LHK_00129 | LHK_00711 | Sensory box/GGDEF family protein. | GGDEF domain protein. | 0.894 |
LHK_00129 | LHK_00815 | LHK_00129 | LHK_00815 | Sensory box/GGDEF family protein. | Diguanylate cyclase/phosphodiesterase domain 2. | 0.893 |
LHK_00129 | LHK_00822 | LHK_00129 | LHK_00822 | Sensory box/GGDEF family protein. | Putative PAS/PAC sensor protein. | 0.999 |
LHK_00129 | LHK_01015 | LHK_00129 | LHK_01015 | Sensory box/GGDEF family protein. | Sensor protein. | 0.991 |
LHK_00129 | LHK_02365 | LHK_00129 | LHK_02365 | Sensory box/GGDEF family protein. | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | 0.893 |
LHK_00129 | LHK_03167 | LHK_00129 | LHK_03167 | Sensory box/GGDEF family protein. | Che; Response regulator receiver protein; similar to RS05112. | 0.600 |
LHK_00129 | LHK_03168 | LHK_00129 | LHK_03168 | Sensory box/GGDEF family protein. | DNA-binding response regulator; Hik39, cheA. | 0.702 |
LHK_00129 | fliF1 | LHK_00129 | LHK_02361 | Sensory box/GGDEF family protein. | FliF1; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.444 |
LHK_00129 | fliN | LHK_00129 | LHK_02353 | Sensory box/GGDEF family protein. | FliN; Flagellar motor switch protein. | 0.479 |
LHK_00673 | LHK_00129 | LHK_00673 | LHK_00129 | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | Sensory box/GGDEF family protein. | 0.892 |
LHK_00673 | LHK_00711 | LHK_00673 | LHK_00711 | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | GGDEF domain protein. | 0.894 |
LHK_00673 | LHK_00815 | LHK_00673 | LHK_00815 | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | Diguanylate cyclase/phosphodiesterase domain 2. | 0.892 |
LHK_00673 | LHK_00822 | LHK_00673 | LHK_00822 | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | Putative PAS/PAC sensor protein. | 0.999 |
LHK_00673 | LHK_01015 | LHK_00673 | LHK_01015 | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | Sensor protein. | 0.992 |
LHK_00673 | LHK_02365 | LHK_00673 | LHK_02365 | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | 0.887 |
LHK_00673 | LHK_03167 | LHK_00673 | LHK_03167 | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | Che; Response regulator receiver protein; similar to RS05112. | 0.600 |
LHK_00673 | LHK_03168 | LHK_00673 | LHK_03168 | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | DNA-binding response regulator; Hik39, cheA. | 0.702 |
LHK_00673 | fliF1 | LHK_00673 | LHK_02361 | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | FliF1; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.444 |
LHK_00673 | fliN | LHK_00673 | LHK_02353 | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | FliN; Flagellar motor switch protein. | 0.479 |
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