Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HAPS_0514 | HAPS_0773 | HAPS_0514 | HAPS_0773 | Predicted helix-turn-helix containing protein; COG:K;COG2944. | Hypothetical prophage protein; COG:S;COG3514. | 0.469 |
HAPS_0514 | HAPS_0774 | HAPS_0514 | HAPS_0774 | Predicted helix-turn-helix containing protein; COG:K;COG2944. | Conserved hypothetical protein; COG:S;COG2929. | 0.471 |
HAPS_0772 | HAPS_0773 | HAPS_0772 | HAPS_0773 | Hypothetical protein. | Hypothetical prophage protein; COG:S;COG3514. | 0.429 |
HAPS_0772 | HAPS_0774 | HAPS_0772 | HAPS_0774 | Hypothetical protein. | Conserved hypothetical protein; COG:S;COG2929. | 0.429 |
HAPS_0773 | HAPS_0514 | HAPS_0773 | HAPS_0514 | Hypothetical prophage protein; COG:S;COG3514. | Predicted helix-turn-helix containing protein; COG:K;COG2944. | 0.469 |
HAPS_0773 | HAPS_0772 | HAPS_0773 | HAPS_0772 | Hypothetical prophage protein; COG:S;COG3514. | Hypothetical protein. | 0.429 |
HAPS_0773 | HAPS_0774 | HAPS_0773 | HAPS_0774 | Hypothetical prophage protein; COG:S;COG3514. | Conserved hypothetical protein; COG:S;COG2929. | 0.983 |
HAPS_0774 | HAPS_0514 | HAPS_0774 | HAPS_0514 | Conserved hypothetical protein; COG:S;COG2929. | Predicted helix-turn-helix containing protein; COG:K;COG2944. | 0.471 |
HAPS_0774 | HAPS_0772 | HAPS_0774 | HAPS_0772 | Conserved hypothetical protein; COG:S;COG2929. | Hypothetical protein. | 0.429 |
HAPS_0774 | HAPS_0773 | HAPS_0774 | HAPS_0773 | Conserved hypothetical protein; COG:S;COG2929. | Hypothetical prophage protein; COG:S;COG3514. | 0.983 |
HAPS_0774 | pilT-2 | HAPS_0774 | HAPS_1908 | Conserved hypothetical protein; COG:S;COG2929. | Plasmid stability-like protein/nucleic acid-binding protein, contains PIN domain; COG:R;COG1487. | 0.448 |
pilT-2 | HAPS_0774 | HAPS_1908 | HAPS_0774 | Plasmid stability-like protein/nucleic acid-binding protein, contains PIN domain; COG:R;COG1487. | Conserved hypothetical protein; COG:S;COG2929. | 0.448 |