STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nanHNeuraminidase/exo-alpha-sialidase nanH; COG:G;COG4409. (668 aa)    
Predicted Functional Partners:
bgaC
Beta-galactosidase, glucosyl hydrolase family protein; COG:G;COG1874; Belongs to the glycosyl hydrolase 35 family.
 
 0.868
sodC
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
  
 0.604
lsgB
Beta-galactosamide-alpha-2,3-sialyltransferase; CMP-N-acetylneuraminate-beta-galactosamide- alpha-2, 3-sialyltransferase/lipopolysaccharide biosynthesis protein.
      
 0.584
sodA
Manganese superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
      
 0.556
HAPS_0648
Putative serine protease.
      
 0.483
bioD-2
Dithiobiotin synthetase; COG:S;COG2830.
  
     0.459
fucI
L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose.
  
     0.441
lon
ATP-dependent protease LA; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
      
 0.429
Your Current Organism:
Glaesserella parasuis
NCBI taxonomy Id: 557723
Other names: G. parasuis SH0165, Glaesserella parasuis SH0165, Haemophilus parasuis SH0165
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.