Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEP66139.1 | CEP66953.1 | 181 | 1109 | Cro/C1-type helix-turn-helix domain. | Cro/C1-type helix-turn-helix domain. | 0.539 |
CEP66139.1 | CEP67107.1 | 181 | 1265 | Cro/C1-type helix-turn-helix domain. | Protein of unknown function DUF955. | 0.445 |
CEP66950.1 | CEP66951.1 | 1106 | 1107 | S-layer homology domain. | Uncharacterized. | 0.862 |
CEP66950.1 | CEP66952.1 | 1106 | 1108 | S-layer homology domain. | Invasin/intimin cell-adhesion. | 0.822 |
CEP66950.1 | CEP66953.1 | 1106 | 1109 | S-layer homology domain. | Cro/C1-type helix-turn-helix domain. | 0.484 |
CEP66951.1 | CEP66950.1 | 1107 | 1106 | Uncharacterized. | S-layer homology domain. | 0.862 |
CEP66951.1 | CEP66952.1 | 1107 | 1108 | Uncharacterized. | Invasin/intimin cell-adhesion. | 0.746 |
CEP66951.1 | CEP66953.1 | 1107 | 1109 | Uncharacterized. | Cro/C1-type helix-turn-helix domain. | 0.469 |
CEP66952.1 | CEP66950.1 | 1108 | 1106 | Invasin/intimin cell-adhesion. | S-layer homology domain. | 0.822 |
CEP66952.1 | CEP66951.1 | 1108 | 1107 | Invasin/intimin cell-adhesion. | Uncharacterized. | 0.746 |
CEP66952.1 | CEP66953.1 | 1108 | 1109 | Invasin/intimin cell-adhesion. | Cro/C1-type helix-turn-helix domain. | 0.484 |
CEP66952.1 | cinA | 1108 | 2951 | Invasin/intimin cell-adhesion. | Competence-induced protein CinA; Belongs to the CinA family. | 0.867 |
CEP66953.1 | CEP66139.1 | 1109 | 181 | Cro/C1-type helix-turn-helix domain. | Cro/C1-type helix-turn-helix domain. | 0.539 |
CEP66953.1 | CEP66950.1 | 1109 | 1106 | Cro/C1-type helix-turn-helix domain. | S-layer homology domain. | 0.484 |
CEP66953.1 | CEP66951.1 | 1109 | 1107 | Cro/C1-type helix-turn-helix domain. | Uncharacterized. | 0.469 |
CEP66953.1 | CEP66952.1 | 1109 | 1108 | Cro/C1-type helix-turn-helix domain. | Invasin/intimin cell-adhesion. | 0.484 |
CEP66953.1 | CEP67107.1 | 1109 | 1265 | Cro/C1-type helix-turn-helix domain. | Protein of unknown function DUF955. | 0.479 |
CEP66953.1 | CEP68187.1 | 1109 | 2390 | Cro/C1-type helix-turn-helix domain. | Pyruvate-flavodoxin oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family. | 0.517 |
CEP66953.1 | CEP68411.1 | 1109 | 2040 | Cro/C1-type helix-turn-helix domain. | Signal transduction response regulator, receiver domain. | 0.546 |
CEP66953.1 | CEP69251.1 | 1109 | 3331 | Cro/C1-type helix-turn-helix domain. | Signal transduction response regulator, receiver domain. | 0.546 |
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