STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP67838.1Cro/C1-type helix-turn-helix domain. (101 aa)    
Predicted Functional Partners:
cinA
Competence-induced protein CinA; Belongs to the CinA family.
    
 0.772
CEP67839.1
Cro/C1-type helix-turn-helix domain.
 
    
0.564
CEP67522.1
RmlC-like jelly roll fold.
  
    0.558
CEP68411.1
Signal transduction response regulator, receiver domain.
    
  0.546
CEP69251.1
Signal transduction response regulator, receiver domain.
    
  0.546
CEP68187.1
Pyruvate-flavodoxin oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
    
 0.517
CEP69179.1
RmlC-like jelly roll fold.
  
     0.515
CEP67840.1
Uncharacterized.
       0.514
Your Current Organism:
Moorella glycerini
NCBI taxonomy Id: 55779
Other names: ATCC 700316, DSM 11254, M. glycerini, strain JW/AS-Y6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.