Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEP66402.1 | CEP67934.1 | 460 | 1429 | GGDEF domain. | Uncharacterized. | 0.620 |
CEP66402.1 | CEP68181.1 | 460 | 2384 | GGDEF domain. | Uncharacterized. | 0.620 |
CEP66402.1 | CEP68182.1 | 460 | 2385 | GGDEF domain. | Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.727 |
CEP66402.1 | CEP68183.1 | 460 | 2386 | GGDEF domain. | Protein phosphatase 2C (PP2C)-like domain. | 0.893 |
CEP66402.1 | CEP68786.1 | 460 | 2892 | GGDEF domain. | STAS domain. | 0.727 |
CEP66402.1 | CEP68787.1 | 460 | 2893 | GGDEF domain. | STAS domain. | 0.727 |
CEP66402.1 | CEP68788.1 | 460 | 2894 | GGDEF domain. | Uncharacterized. | 0.620 |
CEP66402.1 | spoIIAB | 460 | 136 | GGDEF domain. | Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.620 |
CEP67934.1 | CEP66402.1 | 1429 | 460 | Uncharacterized. | GGDEF domain. | 0.620 |
CEP67934.1 | CEP68182.1 | 1429 | 2385 | Uncharacterized. | Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.922 |
CEP67934.1 | CEP68183.1 | 1429 | 2386 | Uncharacterized. | Protein phosphatase 2C (PP2C)-like domain. | 0.868 |
CEP67934.1 | CEP68786.1 | 1429 | 2892 | Uncharacterized. | STAS domain. | 0.981 |
CEP67934.1 | CEP68787.1 | 1429 | 2893 | Uncharacterized. | STAS domain. | 0.994 |
CEP67934.1 | CEP69561.1 | 1429 | 3641 | Uncharacterized. | Flagellar motor switch protein FliM. | 0.700 |
CEP68181.1 | CEP66402.1 | 2384 | 460 | Uncharacterized. | GGDEF domain. | 0.620 |
CEP68181.1 | CEP68182.1 | 2384 | 2385 | Uncharacterized. | Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.992 |
CEP68181.1 | CEP68183.1 | 2384 | 2386 | Uncharacterized. | Protein phosphatase 2C (PP2C)-like domain. | 0.975 |
CEP68181.1 | CEP68185.1 | 2384 | 2388 | Uncharacterized. | Protein of unknown function DUF342. | 0.902 |
CEP68181.1 | CEP68786.1 | 2384 | 2892 | Uncharacterized. | STAS domain. | 0.922 |
CEP68181.1 | CEP68787.1 | 2384 | 2893 | Uncharacterized. | STAS domain. | 0.922 |
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